Detailed information NTG0158520

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AN415_RS10615
• Genome accession: NZ_CP012952
• Coordinates: 2221370..2222071 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594573.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain D36
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2216370..2227071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AN415_RS10585 (AN415_02152)	-	2216668..2217111 (-)	444	WP_001246675.1	SRPBCC family protein	-
AN415_RS10590 (AN415_02153)	tadA	2217181..2217693 (-)	513	WP_001985758.1	tRNA adenosine(34) deaminase TadA	-
AN415_RS10595 (AN415_02154)	-	2217700..2218824 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AN415_RS10600 (AN415_02155)	ung	2218821..2219534 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AN415_RS10605 (AN415_02156)	-	2219585..2220181 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
AN415_RS10610 (AN415_02157)	gspK	2220411..2221370 (-)	960	WP_000301480.1	type II secretion system minor pseudopilin GspK	-
AN415_RS10615 (AN415_02158)	xcpW	2221370..2222071 (-)	702	WP_000594573.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AN415_RS10620 (AN415_02159)	xcpV	2222071..2222451 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AN415_RS10625 (AN415_02160)	-	2222441..2222995 (-)	555	WP_000841373.1	type II secretion system protein	-
AN415_RS10630 (AN415_02161)	-	2223005..2223613 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AN415_RS10635 (AN415_02162)	-	2223651..2224424 (-)	774	WP_000497298.1	TatD family hydrolase	-
AN415_RS10640 (AN415_02163)	-	2224442..2224783 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AN415_RS10645 (AN415_02164)	-	2224795..2225775 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
AN415_RS10650 (AN415_02165)	kdsB	2225787..2226548 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26544.48 Da
• Isoelectric Point: 9.3469

>NTDB_id=158520 AN415_RS10615 WP_000594573.1 2221370..2222071(-) (xcpW) [Acinetobacter baumannii strain D36]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILSFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=158520 AN415_RS10615 WP_000594573.1 2221370..2222071(-) (xcpW) [Acinetobacter baumannii strain D36]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCAGAGCATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTCTAAGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTTTATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.712	100	0.987