Detailed information NTG0158487

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: A9Z04_RS08015
• Genome accession: NZ_CP016007
• Coordinates: 1680857..1682062 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain NGF1
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1675857..1687062

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A9Z04_RS08000 (A9Z04_08000)	-	1676372..1678048 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
A9Z04_RS08005 (A9Z04_08005)	kdsB	1678058..1678798 (+)	741	WP_000030761.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
A9Z04_RS08010 (A9Z04_08010)	-	1678795..1680822 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
A9Z04_RS08015 (A9Z04_08015)	kpsS	1680857..1682062 (+)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
A9Z04_RS08020 (A9Z04_08020)	-	1682212..1683441 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
A9Z04_RS08025 (A9Z04_08025)	-	1683431..1684579 (-)	1149	WP_000197080.1	DUF6716 putative glycosyltransferase	-
A9Z04_RS08030 (A9Z04_08030)	neuC	1684572..1685747 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
A9Z04_RS08035 (A9Z04_08035)	-	1685744..1687000 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=158487 A9Z04_RS08015 WP_001161835.1 1680857..1682062(+) (kpsS) [Escherichia coli strain NGF1]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=158487 A9Z04_RS08015 WP_001161835.1 1680857..1682062(+) (kpsS) [Escherichia coli strain NGF1]
ATGCAAGGTAATGCATTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387