Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   A8O17_RS19525 Genome accession   NZ_CP015975
Coordinates   3733596..3734285 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. subtilis strain delta6     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3728596..3739285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8O17_RS19505 (A8O17_19505) yxeA 3729501..3729848 (-) 348 WP_003227084.1 YxeA family protein -
  A8O17_RS19510 (A8O17_19510) yxdM 3729862..3731730 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  A8O17_RS19515 (A8O17_19515) yxdL 3731705..3732478 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  A8O17_RS19520 (A8O17_19520) yxdK 3732622..3733599 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  A8O17_RS19525 (A8O17_19525) braR 3733596..3734285 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  A8O17_RS19530 (A8O17_19530) iolJ 3734393..3735265 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  A8O17_RS19535 (A8O17_19535) iolI 3735286..3736122 (-) 837 WP_003244546.1 2-keto-myo-inositol isomerase -
  A8O17_RS19540 (A8O17_19540) iolH 3736208..3737077 (-) 870 WP_003243149.1 sugar phosphate isomerase/epimerase -
  A8O17_RS19545 (A8O17_19545) iolG 3737097..3738131 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=158374 A8O17_RS19525 WP_003243527.1 3733596..3734285(-) (braR) [Bacillus subtilis subsp. subtilis strain delta6]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=158374 A8O17_RS19525 WP_003243527.1 3733596..3734285(-) (braR) [Bacillus subtilis subsp. subtilis strain delta6]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment