Detailed information NTG0158179

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: APV63_RS07345
• Genome accession: NZ_CP012905
• Coordinates: 1540198..1541637 (-)
• Length: 479 a.a.
• NCBI ID: WP_060473727.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 7C
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1535198..1546637

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APV63_RS07320 (APV63_07315)	recG	1536330..1538201 (-)	1872	WP_060473726.1	ATP-dependent DNA helicase RecG	-
APV63_RS07325 (APV63_07320)	-	1538283..1538630 (+)	348	WP_000837036.1	hypothetical protein	-
APV63_RS07330 (APV63_07325)	-	1538634..1539269 (+)	636	WP_000668047.1	outer membrane protein	-
APV63_RS07335 (APV63_07330)	-	1539266..1540018 (-)	753	WP_000767544.1	exodeoxyribonuclease III	-
APV63_RS07345 (APV63_07340)	comH	1540198..1541637 (-)	1440	WP_060473727.1	hypothetical protein	Machinery gene
APV63_RS07355 (APV63_07350)	dnaA	1541859..1543226 (-)	1368	WP_060473728.1	chromosomal replication initiator protein DnaA	-
APV63_RS07360 (APV63_07355)	-	1543379..1543921 (+)	543	WP_060473834.1	purine-nucleoside phosphorylase	-
APV63_RS07365 (APV63_07360)	-	1543965..1544204 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
APV63_RS07370 (APV63_07365)	glmS	1544205..1545998 (+)	1794	WP_060473729.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54826.91 Da
• Isoelectric Point: 6.8205

>NTDB_id=158179 APV63_RS07345 WP_060473727.1 1540198..1541637(-) (comH) [Helicobacter pylori strain 7C]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNCPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPINEVKTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNNTPNADISENNESNENKDNVEKQAVRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=158179 APV63_RS07345 WP_060473727.1 1540198..1541637(-) (comH) [Helicobacter pylori strain 7C]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCACCACATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACTCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACTGCCCTACTATCCCTAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAGCCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGCCCTATTAATGAAGTTAAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAGGACAATGTGGAAAAACAAGCCGTTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGACATTACCCCTTGCGATTACAGCAACGCTGAAAATAAAAGCGGTAAAATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACAATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGCGAAAAGACGGCACGACTAGGCAATGCTACCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTAAAAGCCGTATATGAACGCCCTAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAGCGA
ATACAAAGAATGGGTTAAAAACCATGTGCGTTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTAAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	96.451	100	0.965