Detailed information
Bioinformatically predicted
Overview
| Name | radC | Type | Machinery gene |
| Locus tag | A9E94_RS12565 | Genome accession | NZ_CP015954 |
| Coordinates | 2830431..2831114 (+) | Length | 227 a.a. |
| NCBI ID | WP_010948191.1 | Uniprot ID | Q5ZSM8 |
| Organism | Legionella pneumophila strain E7_O | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2825431..2836114
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9E94_RS12550 (A9E94_12550) | - | 2827284..2828672 (-) | 1389 | WP_010948188.1 | phosphomannomutase/phosphoglucomutase | - |
| A9E94_RS12555 (A9E94_12555) | dut | 2828673..2829131 (-) | 459 | WP_014842515.1 | dUTP diphosphatase | - |
| A9E94_RS12560 (A9E94_12560) | coaBC | 2829158..2830354 (-) | 1197 | WP_015444059.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| A9E94_RS12565 (A9E94_12565) | radC | 2830431..2831114 (+) | 684 | WP_010948191.1 | DNA repair protein RadC | Machinery gene |
| A9E94_RS12570 (A9E94_12570) | - | 2831150..2831386 (+) | 237 | WP_015444058.1 | hypothetical protein | - |
| A9E94_RS12575 (A9E94_12575) | lepB | 2831466..2835350 (+) | 3885 | WP_010948192.1 | Dot/Icm T4SS GTPase-activating effector LepB | - |
| A9E94_RS12580 (A9E94_12580) | thpR | 2835473..2836036 (-) | 564 | WP_010948193.1 | RNA 2',3'-cyclic phosphodiesterase | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25749.42 Da Isoelectric Point: 7.0185
>NTDB_id=158079 A9E94_RS12565 WP_010948191.1 2830431..2831114(+) (radC) [Legionella pneumophila strain E7_O]
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIHLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAVFISSGNNKKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIHLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
Nucleotide
Download Length: 684 bp
>NTDB_id=158079 A9E94_RS12565 WP_010948191.1 2830431..2831114(+) (radC) [Legionella pneumophila strain E7_O]
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAACTACTTACTAATGGAGTACATAGCCTCTCTGATAT
TGAATTGTTAGCCGTTTTCATCAGTTCGGGTAACAATAAAAAATCTTGTTTGCAACTAGCCTATGAGCTCACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAGGTTCGTTATGCA
CAACTTCAGGCTGCGAAAGAAATATGTCATCGAAGTGATTTTATTCATCTGCAAAAAGAAATCCGGTTATCTAACACACA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAACCAAC
ACCGAATTATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACGGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCATCCCTCGGGCTTGTCTGATGCAAGCCAGCAAGATTT
AGCCATTACAGAACGCATTCGAGATGCTCTGGATTTGGTAGATGCCCGGTTACTGGATCACATTGTCATTGGGGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAG
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAACTACTTACTAATGGAGTACATAGCCTCTCTGATAT
TGAATTGTTAGCCGTTTTCATCAGTTCGGGTAACAATAAAAAATCTTGTTTGCAACTAGCCTATGAGCTCACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAGGTTCGTTATGCA
CAACTTCAGGCTGCGAAAGAAATATGTCATCGAAGTGATTTTATTCATCTGCAAAAAGAAATCCGGTTATCTAACACACA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAACCAAC
ACCGAATTATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACGGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCATCCCTCGGGCTTGTCTGATGCAAGCCAGCAAGATTT
AGCCATTACAGAACGCATTCGAGATGCTCTGGATTTGGTAGATGCCCGGTTACTGGATCACATTGTCATTGGGGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radC | Haemophilus influenzae Rd KW20 |
43.119 |
96.035 |
0.414 |