Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   KLP1_RS22330 Genome accession   NZ_CP012883
Coordinates   4513672..4514268 (+) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae KP-1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4508672..4519268
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KLP1_RS22310 (KLP1_22240) - 4508864..4510621 (-) 1758 WP_004191101.1 AAA family ATPase -
  KLP1_RS22315 (KLP1_22245) matP 4510807..4511259 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  KLP1_RS22320 (KLP1_22250) ompA 4511391..4512461 (-) 1071 WP_002898408.1 porin OmpA -
  KLP1_RS22325 (KLP1_22255) sulA 4512814..4513323 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  KLP1_RS22330 (KLP1_22260) sxy/tfoX 4513672..4514268 (+) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  KLP1_RS22335 (KLP1_22265) yccS 4514282..4516417 (-) 2136 WP_002898422.1 YccS family putative transporter -
  KLP1_RS22340 (KLP1_22270) - 4516435..4516881 (-) 447 WP_002898425.1 YccF domain-containing protein -
  KLP1_RS22345 (KLP1_22275) helD 4517006..4519060 (+) 2055 WP_004179218.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=158074 KLP1_RS22330 WP_004150836.1 4513672..4514268(+) (sxy/tfoX) [Klebsiella pneumoniae KP-1]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=158074 KLP1_RS22330 WP_004150836.1 4513672..4514268(+) (sxy/tfoX) [Klebsiella pneumoniae KP-1]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment