Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   AOT11_RS19720 Genome accession   NZ_CP012882
Coordinates   922163..923263 (+) Length   366 a.a.
NCBI ID   WP_017421657.1    Uniprot ID   A0A2S3SAB2
Organism   Vibrio vulnificus NBRC 15645 = ATCC 27562     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 917163..928263
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOT11_RS19690 (AOT11_03725) - 917524..918861 (+) 1338 Protein_735 IS4 family transposase -
  AOT11_RS19695 (AOT11_03730) - 918912..919226 (-) 315 WP_011081685.1 DUF496 family protein -
  AOT11_RS19700 (AOT11_03735) - 919496..919705 (+) 210 WP_017421653.1 hypothetical protein -
  AOT11_RS19705 (AOT11_03740) - 919771..920433 (+) 663 WP_026050678.1 YceH family protein -
  AOT11_RS19710 (AOT11_03745) - 920433..920729 (+) 297 WP_017421655.1 GIY-YIG nuclease family protein -
  AOT11_RS19715 (AOT11_03750) traF 920806..921975 (+) 1170 WP_026050679.1 conjugal transfer protein TraF -
  AOT11_RS19720 (AOT11_03755) luxP 922163..923263 (+) 1101 WP_017421657.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  AOT11_RS19725 (AOT11_03760) luxQ 923260..925833 (+) 2574 WP_017421658.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  AOT11_RS19730 (AOT11_03765) - 925830..926489 (-) 660 WP_017421659.1 PilZ domain-containing protein -
  AOT11_RS19735 (AOT11_03770) - 926631..927605 (-) 975 WP_017421660.1 DMT family transporter -
  AOT11_RS19740 (AOT11_03775) - 927753..928214 (+) 462 WP_011081676.1 Lrp/AsnC family transcriptional regulator -

Sequence


Protein


Download         Length: 366 a.a.        Molecular weight: 41367.91 Da        Isoelectric Point: 6.7734

>NTDB_id=158050 AOT11_RS19720 WP_017421657.1 922163..923263(+) (luxP) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MKKILLTCLLASASFHVSSHTSEVLSGYWAYQEFLEKFPQQGVLTRELSQVVRNAPVPLKRHQSKPIRISVVFPGQQISD
YWVRNLSAFEKRMDKLQISYQINQVFTRPNADVKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSETKLILQNI
TTPVQAWDKRQPFLYVGFDHAEGSIALADKFKQLYPQGANYSVLYFSEGYVSDARGDTFIHQMNHSDRFALKSSFYTKAT
KASGYESAINSLERYPDVDFIYACSTDVALGAIDALKDLGRTNIKINGWGGGSAELDAIAAGDLDLTVMRMNDDTGIAMA
EAIKWDIEGRTVPTVFSGDFEVVTKEDSPEHIELLKKRAFRYSDQP

Nucleotide


Download         Length: 1101 bp        

>NTDB_id=158050 AOT11_RS19720 WP_017421657.1 922163..923263(+) (luxP) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGAAAAAGATATTACTAACTTGTTTATTAGCGTCAGCAAGTTTTCATGTAAGCTCACATACGTCAGAAGTCCTCAGTGG
GTACTGGGCTTATCAAGAATTTTTGGAAAAATTTCCTCAACAAGGCGTGCTCACACGAGAACTGTCTCAGGTGGTTAGGA
ATGCGCCTGTGCCTTTAAAGCGTCATCAATCCAAGCCGATACGAATTTCAGTGGTATTTCCTGGTCAGCAGATCTCCGAT
TACTGGGTAAGAAATCTTTCCGCGTTTGAGAAACGCATGGATAAGCTGCAGATCAGTTACCAAATCAATCAGGTTTTCAC
GCGGCCAAATGCCGATGTTAAGCAGCAAAGCGTTTCCTTGATGGAAGCGTTAAAGAGCAAATCGGATTACCTCATTTTTA
CGCTCGATACGACGCGCCACCGCAAGTTCATTGAGCATGTATTAGACTCTTCCGAAACCAAGCTGATCCTGCAAAATATC
ACCACACCAGTTCAAGCCTGGGACAAAAGACAGCCATTTCTCTACGTCGGCTTTGACCATGCAGAAGGGAGTATTGCGCT
GGCCGATAAGTTTAAACAGCTCTACCCACAAGGTGCAAATTACTCGGTTCTCTACTTTTCAGAAGGTTATGTGAGTGATG
CTCGCGGTGACACCTTTATACATCAGATGAATCACAGTGACCGATTTGCCCTAAAAAGCTCTTTTTACACCAAAGCGACC
AAGGCCTCAGGCTATGAGTCCGCAATAAACAGTTTAGAGCGCTATCCTGATGTGGATTTTATCTACGCCTGCTCTACCGA
TGTGGCCCTTGGTGCCATTGATGCATTGAAAGATCTGGGGCGCACAAACATCAAGATCAATGGATGGGGTGGTGGTTCTG
CTGAGCTTGACGCAATCGCGGCAGGTGATCTTGATTTGACAGTAATGCGCATGAACGATGATACAGGAATCGCTATGGCT
GAGGCGATCAAATGGGACATTGAAGGAAGAACCGTCCCGACCGTCTTTTCTGGCGACTTTGAAGTGGTGACAAAAGAGGA
TTCGCCAGAACACATCGAACTATTGAAAAAACGCGCGTTTAGATATTCAGATCAGCCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2S3SAB2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

64.11

99.727

0.639


Multiple sequence alignment