Detailed information NTG0158026

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AOT11_RS08535
• Genome accession: NZ_CP012881
• Coordinates: 1823580..1824587 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus NBRC 15645 = ATCC 27562
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1818580..1829587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOT11_RS08505 (AOT11_15540)	zapB	1818718..1818960 (-)	243	WP_017419636.1	cell division protein ZapB	-
AOT11_RS08510 (AOT11_15545)	rraA	1819182..1819694 (-)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
AOT11_RS08515 (AOT11_15550)	-	1819770..1820687 (-)	918	WP_017419638.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AOT11_RS08520 (AOT11_15555)	hslU	1820852..1822183 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
AOT11_RS08525 (AOT11_15560)	hslV	1822211..1822765 (-)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
AOT11_RS08530 (AOT11_15565)	-	1822915..1823472 (-)	558	WP_017419640.1	SPOR domain-containing protein	-
AOT11_RS08535 (AOT11_15570)	cytR	1823580..1824587 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
AOT11_RS08540 (AOT11_15575)	priA	1824816..1827020 (-)	2205	WP_026050203.1	primosomal protein N'	-
AOT11_RS08545 (AOT11_15580)	rpmE	1827301..1827522 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
AOT11_RS08550 (AOT11_15585)	-	1827801..1829078 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
AOT11_RS08555 (AOT11_15590)	metJ	1829164..1829481 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=158026 AOT11_RS08535 WP_011079334.1 1823580..1824587(-) (cytR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=158026 AOT11_RS08535 WP_011079334.1 1823580..1824587(-) (cytR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCCGGCATCACAATGAACCCACAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCC
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCACCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875