Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   AOT11_RS01725 Genome accession   NZ_CP012881
Coordinates   391994..393394 (-) Length   466 a.a.
NCBI ID   WP_017428872.1    Uniprot ID   -
Organism   Vibrio vulnificus NBRC 15645 = ATCC 27562     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 386994..398394
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOT11_RS01690 (AOT11_08850) moaE 387603..388058 (-) 456 WP_011080885.1 molybdopterin synthase catalytic subunit MoaE -
  AOT11_RS01695 (AOT11_08855) moaD 388060..388305 (-) 246 WP_011080886.1 molybdopterin synthase sulfur carrier subunit -
  AOT11_RS01700 (AOT11_08860) moaC 388302..388781 (-) 480 WP_017428877.1 cyclic pyranopterin monophosphate synthase MoaC -
  AOT11_RS01705 (AOT11_08865) moaB 388792..389287 (-) 496 Protein_333 molybdenum cofactor biosynthesis protein B -
  AOT11_RS01710 (AOT11_08870) moaA 389366..390355 (-) 990 WP_017428875.1 GTP 3',8-cyclase MoaA -
  AOT11_RS01715 (AOT11_08875) - 390670..391560 (+) 891 WP_017428874.1 YvcK family protein -
  AOT11_RS01720 (AOT11_08880) luxU 391647..391994 (-) 348 WP_017428873.1 quorum-sensing phosphorelay protein LuxU -
  AOT11_RS01725 (AOT11_08885) luxO 391994..393394 (-) 1401 WP_017428872.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  AOT11_RS01730 (AOT11_08890) uvrB 393702..395732 (-) 2031 WP_026050797.1 excinuclease ABC subunit UvrB -
  AOT11_RS01735 (AOT11_08895) - 395827..396015 (-) 189 WP_017428870.1 hypothetical protein -
  AOT11_RS01745 (AOT11_08905) rsxA 396613..397191 (+) 579 WP_017428869.1 electron transport complex subunit RsxA -
  AOT11_RS01750 (AOT11_08910) rsxB 397193..397789 (+) 597 WP_011080896.1 electron transport complex subunit RsxB -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52098.58 Da        Isoelectric Point: 6.2540

>NTDB_id=158012 AOT11_RS01725 WP_017428872.1 391994..393394(-) (luxO) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MQQITTTKQRYLLMVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASHP
DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLKNDSDSAGSQNYQGFIGSSQKMQQVYRTI
DSAASSKASIFITGESGTGKEVCAEAIHAASRRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGG
TLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRER
GEDVIEIAYSLLGYMSHEEGKNFVRFSQSVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKES
AQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWNEKEEKQKA

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=158012 AOT11_RS01725 WP_017428872.1 391994..393394(-) (luxO) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGCAACAAATAACGACAACGAAACAGCGTTACTTGCTGATGGTAGAAGACACCGCTTCTGTCGCAGCCCTCTATCGCTC
CTATCTCATGCCATTGGGTATCGATATCAATATCGTGGGTACTGGGCGTGACGCGATAGACAGTTTAAAACATCGCATTC
CAGATCTTATTCTGCTGGACTTACGCCTACCGGACATGACGGGAATGGACGTATTGCATGCAGTGAAAGCAAGCCACCCT
GATGTTCCTATCATTTTCATGACCGCACACGGCTCGATCGATACTGCTGTTGAAGCAATGCGACACGGCTCGCAAGATTT
CTTGATCAAACCCTGTGAAGCTGACCGACTCAGGGTCACGGTGAACAACGCTATCCGCAAGGCGAGCAAGCTAAAAAATG
ATTCAGACAGCGCCGGAAGTCAGAATTATCAAGGCTTTATCGGCAGTAGTCAAAAAATGCAGCAGGTCTACCGAACCATT
GACTCGGCGGCCAGTAGTAAAGCGAGTATTTTTATCACTGGTGAAAGTGGTACGGGTAAAGAGGTGTGCGCAGAAGCCAT
TCATGCAGCCAGTCGACGCGGAGACAAGCCATTTATCGCGATTAACTGTGCAGCGATCCCCAAGGATTTGATTGAAAGCG
AGCTATTTGGGCATGTCAAAGGTGCGTTTACTGGCGCAGCGACCGATCGCCAAGGGGCAGCAGAGCTCGCCGATGGAGGC
ACACTGTTCCTTGATGAGCTGTGTGAAATGGACCTAGATCTGCAAACAAAATTGCTGCGTTTTATCCAAACGGGTACTTT
CCAAAAAGTGGGCTCTTCAAAAATGAAGAGTGTTGACGTGCGTTTTGTGTGCGCGACAAACCGAGACCCTTGGAAAGAAG
TACAAGAAGGGCGCTTTCGTGAAGATTTGTACTACCGACTTTATGTGATTCCACTGCACTTGCCACCACTTCGTGAGCGT
GGAGAGGATGTCATTGAGATCGCTTACTCGTTACTGGGTTATATGTCACATGAGGAAGGGAAAAACTTTGTTCGTTTCTC
TCAATCTGTGATAGATAGATTTAATGAATATGAGTGGCCAGGCAATGTGCGTCAGTTACAAAATGTGCTGCGTAACGTGG
TGGTACTTAACAACGGTAAAGAGATTACCATGGAGATGTTGCCGCCTCCTTTGAATCAGCCCTTTGAACGCAAAGAAAGT
GCGCAACCTGATCTGAGTGAGTTGATTTCCGTCAGGGATATTTGTCCATTGTGGTTGACCGAGAAACTGGCGATTGAACA
AGCGATTAAAGCGTGTGATGGTAACATTCCGAGAGCCGCAGGCTATCTTGATGTCAGCCCGTCGACGATTTATCGCAAGT
TACAGGCGTGGAATGAAAAAGAAGAAAAACAGAAAGCATAA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(417-457)

Response regulator receiver domain (Response_reg)

(13-121)

Sigma-54 interaction domain (Sigma54_activat)

(147-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

86.323

95.708

0.826

Multiple sequence alignment