Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   AO703_RS08010 Genome accession   NZ_CP012871
Coordinates   1733493..1734107 (+) Length   204 a.a.
NCBI ID   WP_062740801.1    Uniprot ID   A0A806XBG1
Organism   [Enterobacter] lignolyticus strain G5     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1728493..1739107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AO703_RS07990 (AO703_07960) - 1728910..1730667 (-) 1758 WP_062740800.1 AAA family ATPase -
  AO703_RS07995 (AO703_07965) matP 1730852..1731304 (+) 453 WP_013366822.1 macrodomain Ter protein MatP -
  AO703_RS08000 (AO703_07970) ompA 1731371..1732426 (-) 1056 WP_125452100.1 porin OmpA -
  AO703_RS08005 (AO703_07975) sulA 1732777..1733277 (-) 501 WP_013366820.1 SOS-induced cell division inhibitor SulA -
  AO703_RS08010 (AO703_07980) sxy/tfoX 1733493..1734107 (+) 615 WP_062740801.1 TfoX/Sxy family DNA transformation protein Regulator
  AO703_RS08015 (AO703_07985) yccS 1734104..1736239 (-) 2136 WP_062740802.1 YccS family putative transporter -
  AO703_RS08020 (AO703_07990) - 1736257..1736703 (-) 447 WP_013366817.1 YccF domain-containing protein -
  AO703_RS08025 (AO703_07995) helD 1736828..1738882 (+) 2055 WP_062740803.1 DNA helicase IV -

Sequence

Protein


Download         Length: 204 a.a.        Molecular weight: 23520.24 Da        Isoelectric Point: 10.1793

>NTDB_id=157959 AO703_RS08010 WP_062740801.1 1733493..1734107(+) (sxy/tfoX) [[Enterobacter] lignolyticus strain G5]
MKKLSYQRIYESEECLSPLGKIRHRALFGGYSLSVDDTVFAMVAEGELYLRVCEESATYHVTHPPTLLTLSKRGRRVSLN
YYRVDDELWLNRPLLLQLSKQALGEALQEKRRRRGTGRLKDLPNISFQLEMLLHESGVKDPQTLRALGSATVWFRLRRLR
KDLNVSVLFALEGAILGLHAAAIPHQRRQHLQEWAEMLTQEKKG

Nucleotide


Download         Length: 615 bp        

>NTDB_id=157959 AO703_RS08010 WP_062740801.1 1733493..1734107(+) (sxy/tfoX) [[Enterobacter] lignolyticus strain G5]
ATGAAAAAATTATCGTATCAACGGATCTATGAATCTGAAGAATGTTTGTCGCCTCTGGGAAAGATTCGCCATCGCGCGCT
GTTTGGCGGGTACAGCCTCTCCGTCGACGACACGGTATTCGCCATGGTGGCGGAGGGAGAGCTGTACCTCAGGGTATGCG
AGGAAAGCGCGACCTATCACGTTACGCATCCGCCGACGCTGCTGACGCTCTCGAAACGCGGCAGGCGCGTCTCCCTGAAC
TATTACCGGGTGGATGACGAACTCTGGCTGAACAGGCCTTTGCTGTTGCAGCTGTCGAAGCAGGCGCTTGGCGAAGCGCT
GCAGGAGAAACGGCGACGACGGGGAACGGGGCGGCTGAAGGATTTACCGAATATCTCGTTCCAGCTGGAGATGCTGCTGC
ATGAAAGCGGCGTCAAGGATCCGCAAACGCTTCGCGCGCTGGGCTCCGCCACCGTCTGGTTTCGACTGCGCAGGCTCAGA
AAAGATTTGAACGTGAGCGTTCTGTTTGCTCTGGAAGGCGCAATACTTGGGCTCCATGCGGCGGCTATTCCGCACCAGCG
GCGTCAGCATCTGCAGGAATGGGCTGAGATGCTGACACAGGAGAAGAAAGGTTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A806XBG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

57.143

99.51

0.569

Multiple sequence alignment