Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA5 | Type | Machinery gene |
| Locus tag | AOY38_RS10460 | Genome accession | NZ_CP012832 |
| Coordinates | 2219063..2219521 (+) | Length | 152 a.a. |
| NCBI ID | WP_020862233.1 | Uniprot ID | - |
| Organism | Synechocystis sp. PCC 6803 substr. GT-G | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2214063..2224521
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY38_RS10445 (AOY38_10435) | - | 2214366..2217065 (-) | 2700 | WP_010873202.1 | chloride channel protein | - |
| AOY38_RS10450 (AOY38_10440) | - | 2217180..2217683 (+) | 504 | WP_020862235.1 | hypothetical protein | - |
| AOY38_RS10455 (AOY38_10445) | - | 2217676..2218851 (+) | 1176 | WP_020862234.1 | DUF58 domain-containing protein | - |
| AOY38_RS10460 (AOY38_10450) | pilA/pilA5 | 2219063..2219521 (+) | 459 | WP_020862233.1 | hypothetical protein | Machinery gene |
| AOY38_RS16780 | - | 2219538..2220089 (+) | 552 | WP_010873206.1 | type II secretion system protein | - |
| AOY38_RS10470 (AOY38_10460) | - | 2220206..2220766 (+) | 561 | WP_010873207.1 | type II secretion system protein | - |
| AOY38_RS16785 | - | 2220788..2221705 (+) | 918 | WP_010873208.1 | hypothetical protein | - |
| AOY38_RS10475 (AOY38_10465) | - | 2221763..2222458 (+) | 696 | WP_010873209.1 | alpha/beta hydrolase | - |
| AOY38_RS10480 (AOY38_10470) | - | 2222679..2222969 (-) | 291 | WP_223211274.1 | hypothetical protein | - |
| AOY38_RS10485 (AOY38_10475) | - | 2223168..2223599 (-) | 432 | WP_010873211.1 | hypothetical protein | - |
| AOY38_RS10490 (AOY38_10480) | - | 2223656..2224420 (-) | 765 | WP_010873212.1 | IS5 family transposase | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 16141.38 Da Isoelectric Point: 4.3321
>NTDB_id=157838 AOY38_RS10460 WP_020862233.1 2219063..2219521(+) (pilA/pilA5) [Synechocystis sp. PCC 6803 substr. GT-G]
MFEVLIALMISFLFLTGTLNAMVMATVMRVKAEREAQAGYWIKEDLEQVRALAANFNPATGNGCPTSVGETFRDANNSAD
ADPNNDGLASLPVPANKSIVGVTAAITRTPGVSNNVLTLSYRVRNTNVTDNDMATLATLYTEVLPAAALACE
MFEVLIALMISFLFLTGTLNAMVMATVMRVKAEREAQAGYWIKEDLEQVRALAANFNPATGNGCPTSVGETFRDANNSAD
ADPNNDGLASLPVPANKSIVGVTAAITRTPGVSNNVLTLSYRVRNTNVTDNDMATLATLYTEVLPAAALACE
Nucleotide
Download Length: 459 bp
>NTDB_id=157838 AOY38_RS10460 WP_020862233.1 2219063..2219521(+) (pilA/pilA5) [Synechocystis sp. PCC 6803 substr. GT-G]
ATGTTCGAGGTGCTGATTGCCTTGATGATTTCCTTTCTATTTCTGACAGGAACCCTGAATGCCATGGTAATGGCAACGGT
AATGCGGGTTAAAGCGGAAAGAGAGGCCCAAGCTGGCTATTGGATAAAAGAAGATTTAGAGCAAGTTCGGGCATTAGCTG
CAAACTTCAATCCGGCAACTGGTAATGGATGCCCTACAAGTGTGGGTGAAACTTTTCGAGATGCAAACAATAGTGCTGAC
GCCGATCCTAACAATGATGGACTAGCGAGCTTACCAGTTCCTGCCAACAAATCAATTGTCGGTGTAACAGCCGCTATTAC
TAGAACACCAGGGGTATCTAATAACGTTTTAACTCTTAGCTATCGTGTCAGGAACACCAATGTCACCGACAATGATATGG
CTACCCTTGCAACACTTTACACCGAGGTTCTTCCTGCTGCCGCTCTTGCTTGTGAATAG
ATGTTCGAGGTGCTGATTGCCTTGATGATTTCCTTTCTATTTCTGACAGGAACCCTGAATGCCATGGTAATGGCAACGGT
AATGCGGGTTAAAGCGGAAAGAGAGGCCCAAGCTGGCTATTGGATAAAAGAAGATTTAGAGCAAGTTCGGGCATTAGCTG
CAAACTTCAATCCGGCAACTGGTAATGGATGCCCTACAAGTGTGGGTGAAACTTTTCGAGATGCAAACAATAGTGCTGAC
GCCGATCCTAACAATGATGGACTAGCGAGCTTACCAGTTCCTGCCAACAAATCAATTGTCGGTGTAACAGCCGCTATTAC
TAGAACACCAGGGGTATCTAATAACGTTTTAACTCTTAGCTATCGTGTCAGGAACACCAATGTCACCGACAATGATATGG
CTACCCTTGCAACACTTTACACCGAGGTTCTTCCTGCTGCCGCTCTTGCTTGTGAATAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilA5 | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |