Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | AOY38_RS08845 | Genome accession | NZ_CP012832 |
| Coordinates | 1866811..1867638 (+) | Length | 275 a.a. |
| NCBI ID | WP_010872899.1 | Uniprot ID | - |
| Organism | Synechocystis sp. PCC 6803 substr. GT-G | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1861811..1872638
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY38_RS08820 (AOY38_08815) | - | 1862321..1863061 (+) | 741 | WP_010872894.1 | WecB/TagA/CpsF family glycosyltransferase | - |
| AOY38_RS08825 (AOY38_08820) | - | 1863313..1864077 (+) | 765 | WP_010872895.1 | iron uptake porin | - |
| AOY38_RS08830 (AOY38_08825) | - | 1864107..1864547 (+) | 441 | WP_010872896.1 | hypothetical protein | - |
| AOY38_RS08835 (AOY38_08830) | pilM | 1864732..1865835 (+) | 1104 | WP_010872897.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| AOY38_RS08840 (AOY38_08835) | pilN | 1865917..1866771 (+) | 855 | WP_010872898.1 | PilN domain-containing protein | Machinery gene |
| AOY38_RS08845 (AOY38_08840) | pilO | 1866811..1867638 (+) | 828 | WP_010872899.1 | pilus assembly protein | Machinery gene |
| AOY38_RS08850 (AOY38_08845) | pilQ | 1867734..1870076 (+) | 2343 | WP_020862340.1 | type IV pilus secretin PilQ | Machinery gene |
| AOY38_RS08855 (AOY38_08850) | - | 1870085..1870909 (-) | 825 | WP_010872901.1 | FkbM family methyltransferase | - |
| AOY38_RS08860 (AOY38_08855) | - | 1870929..1871663 (-) | 735 | WP_010872902.1 | FkbM family methyltransferase | - |
Sequence
Protein
Download Length: 275 a.a. Molecular weight: 30066.97 Da Isoelectric Point: 3.9599
>NTDB_id=157834 AOY38_RS08845 WP_010872899.1 1866811..1867638(+) (pilO) [Synechocystis sp. PCC 6803 substr. GT-G]
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
MTSYSEEYSSTTTIIDEEFDAGGNYPTAFGITFTPQVSGISLGILGLLAMGYVLLNFVMPALGEYQQLRQDEEAKQAQVD
QQSPEVLMRRLANAEVQLQEAQQRKATVLELYANSEDLNTILYNFNTLFVNRNVKLVSFLPQGDPVVISDDSLGANAKNQ
LKRQTYTISMTGGFSETLALIRDIERLQPLILMKNLRTSLVNPEFPVNVVRDGDTVQVQTDAPDILTTDLTLEVFMPLTP
EEIAALTPPPPPPGQEGQPPAEGQPPAEGQAAPAP
Nucleotide
Download Length: 828 bp
>NTDB_id=157834 AOY38_RS08845 WP_010872899.1 1866811..1867638(+) (pilO) [Synechocystis sp. PCC 6803 substr. GT-G]
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
ATGACCAGCTACAGCGAAGAGTATTCATCAACGACAACAATTATTGATGAGGAATTTGATGCGGGAGGAAATTATCCAAC
TGCATTTGGGATAACCTTCACCCCCCAGGTAAGTGGCATTAGTTTAGGTATTCTTGGCTTGCTGGCCATGGGTTATGTTC
TGCTCAATTTTGTCATGCCAGCTTTGGGAGAATATCAACAACTAAGACAGGACGAAGAAGCTAAACAAGCTCAAGTGGAT
CAGCAGTCCCCGGAAGTGTTGATGCGTCGGCTAGCCAATGCGGAGGTGCAGTTACAGGAAGCTCAACAGCGTAAAGCGAC
AGTGTTGGAACTCTACGCCAATAGCGAGGACTTGAACACAATCCTCTATAACTTCAATACTCTATTCGTAAATAGAAACG
TGAAGTTAGTCAGCTTTTTGCCCCAGGGAGATCCGGTGGTAATCTCCGATGATAGTCTGGGGGCAAACGCAAAAAATCAG
CTTAAACGACAAACTTATACCATTTCCATGACGGGCGGTTTTAGTGAAACCCTGGCATTAATTCGGGATATTGAACGGCT
GCAACCGTTAATTTTGATGAAAAATTTGCGGACTAGCTTGGTTAATCCAGAATTTCCAGTCAATGTGGTTAGGGATGGTG
ACACTGTACAAGTGCAAACTGATGCGCCAGATATCCTAACTACGGATTTAACGTTGGAGGTGTTTATGCCATTAACCCCT
GAGGAGATTGCCGCCCTGACTCCTCCCCCGCCGCCGCCTGGACAGGAGGGTCAACCACCGGCTGAGGGACAACCTCCAGC
GGAAGGACAAGCGGCCCCGGCCCCCTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Synechocystis sp. PCC 6803 |
100 |
100 |
1 |