Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   AOY20_RS02995 Genome accession   NZ_CP012808
Coordinates   631774..633336 (+) Length   520 a.a.
NCBI ID   WP_054580488.1    Uniprot ID   A0A0N9VBY0
Organism   Acinetobacter equi strain 114     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 626774..638336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AOY20_RS02975 (AOY20_02975) - 627246..628550 (+) 1305 WP_054580485.1 homoserine dehydrogenase -
  AOY20_RS02980 (AOY20_02980) thrC 628618..629757 (+) 1140 WP_054580486.1 threonine synthase -
  AOY20_RS02985 (AOY20_02985) - 629851..630903 (-) 1053 WP_144424753.1 D-alanyl-D-alanine carboxypeptidase family protein -
  AOY20_RS02990 (AOY20_02990) - 631121..631756 (+) 636 WP_054582524.1 response regulator -
  AOY20_RS02995 (AOY20_02995) pilS 631774..633336 (+) 1563 WP_054580488.1 two-component system sensor histidine kinase NtrB Regulator
  AOY20_RS03000 (AOY20_03000) pilR 633412..634758 (+) 1347 WP_054580489.1 sigma-54-dependent transcriptional regulator Regulator
  AOY20_RS03005 (AOY20_03005) - 634791..635960 (-) 1170 WP_054580490.1 S41 family peptidase -
  AOY20_RS03010 (AOY20_03010) gpmI 635981..637528 (-) 1548 WP_054580491.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 520 a.a.        Molecular weight: 59449.05 Da        Isoelectric Point: 7.0000

>NTDB_id=157744 AOY20_RS02995 WP_054580488.1 631774..633336(+) (pilS) [Acinetobacter equi strain 114]
MLYHHTRLSQYHLGLWYGSYRCIIAVCLLIVFFSNTQSADTNYIFPQLYLLTLICYVILSSLQLISYIFFNLKINQNITL
FFAIDVIVYSLLTFASHGSNFSVNLLFTITIFAASILLESKKALLITLIAVISVVYQYIVGSLFSIINLGQVGNSALLAI
IFLFVYVGGQITIKRFRSLEKSNYRQSLELHQLQNINRHILEQIETGYLVLTQTGDMILSNPASRKLLGIPPSQETENVS
LQYLQPDLFQRLDLATLQDGDKFQFTSRLAEYHTVIHIQELKVPQQTLVLLTIQDAKFLNQQVQQLKLAALGQLSASIAH
EIRNPLAAIMQANQLYLQSSSIEQKQLTEMIDRQALRMNKIIEDTLGMAKNKETTPTRIELDYFLKYFLQEDLSDIYQKI
RVESEPNLSILFDELQLRQILINLIRNAIKHNNPDYSYILLKTYKKQNVVRIEIQDFGSGVAQQDLNDLFKPFFSTDING
TGLGLYLSMSFCEANQAKLSYVEKEFGACFRIECSNLAVI

Nucleotide


Download         Length: 1563 bp        

>NTDB_id=157744 AOY20_RS02995 WP_054580488.1 631774..633336(+) (pilS) [Acinetobacter equi strain 114]
ATGCTCTATCATCATACACGTTTGAGCCAGTACCATCTTGGATTATGGTATGGTTCATACCGTTGTATTATTGCCGTCTG
TCTCTTAATTGTTTTCTTTTCAAATACTCAAAGCGCTGATACGAACTATATTTTTCCGCAACTGTATCTTCTTACTCTTA
TTTGTTACGTTATTTTAAGTTCACTCCAACTCATAAGCTACATATTTTTCAATCTAAAAATAAATCAAAATATAACACTA
TTTTTTGCTATAGATGTCATCGTTTATAGCCTATTAACCTTTGCTTCTCACGGTTCAAATTTTTCTGTCAATTTGCTCTT
TACAATCACTATTTTTGCTGCCTCTATTCTTCTTGAATCTAAAAAAGCACTTTTAATTACTCTCATTGCCGTCATTAGCG
TTGTTTATCAGTATATCGTAGGAAGCTTATTTTCCATTATTAATCTAGGTCAGGTTGGAAATAGTGCACTTTTAGCCATC
ATTTTTTTATTCGTTTATGTGGGTGGACAAATCACGATAAAACGTTTCCGCTCATTAGAAAAATCAAATTATCGTCAATC
TTTAGAGCTTCATCAATTACAAAATATTAATCGTCATATTCTTGAACAAATTGAAACGGGATATTTAGTTTTAACTCAAA
CAGGAGACATGATTTTAAGCAATCCAGCTTCTAGAAAACTCTTAGGAATACCCCCCTCACAAGAAACAGAAAATGTATCC
TTACAATATCTACAGCCAGATTTATTTCAACGTTTAGACCTAGCAACCTTACAAGATGGAGACAAATTTCAATTTACCTC
TCGTTTAGCTGAATATCACACAGTGATCCACATACAAGAGCTCAAAGTTCCACAACAAACATTAGTTTTATTAACTATTC
AAGATGCAAAATTTCTAAATCAGCAAGTTCAACAACTTAAATTAGCTGCTTTAGGACAACTCTCAGCCAGTATTGCACAT
GAAATTCGCAATCCTTTAGCTGCAATCATGCAAGCGAACCAACTTTATTTACAAAGTAGCTCAATAGAACAAAAACAATT
AACAGAAATGATTGATCGGCAAGCATTAAGAATGAATAAAATTATTGAAGACACTTTAGGTATGGCAAAAAATAAAGAAA
CCACACCAACTCGTATTGAACTTGATTATTTTTTAAAGTATTTTTTACAAGAAGATTTATCCGATATTTATCAAAAAATA
AGAGTAGAATCTGAACCTAATTTAAGTATATTATTTGATGAATTACAATTAAGGCAAATTCTAATCAATTTGATTCGAAA
TGCTATAAAACATAATAATCCAGATTACAGCTATATTTTGCTTAAAACATACAAAAAACAAAACGTAGTGAGAATAGAAA
TTCAAGATTTTGGTTCAGGAGTTGCCCAACAAGATCTTAATGATTTATTTAAACCTTTCTTTAGCACTGACATTAATGGT
ACAGGCTTAGGATTATATTTATCGATGAGTTTTTGCGAAGCAAATCAAGCCAAACTAAGCTATGTAGAAAAAGAGTTTGG
GGCATGCTTTAGAATTGAGTGTTCAAATTTAGCTGTAATTTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(413-512)

His Kinase A (phospho-acceptor) domain (HisKA)

(310-371)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0N9VBY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

52.277

97.115

0.508

Multiple sequence alignment