Detailed information    

insolico Bioinformatically predicted

Overview

Name   micB   Type   Regulator
Locus tag   SanJ4211_RS03615 Genome accession   NZ_CP012805
Coordinates   720296..721648 (+) Length   450 a.a.
NCBI ID   WP_021001532.1    Uniprot ID   A0AAP6BQL7
Organism   Streptococcus anginosus strain J4211     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 715296..726648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS03590 (SanJ4211_0691) ccpA 715447..716451 (+) 1005 WP_022526272.1 catabolite control protein A Regulator
  SanJ4211_RS03595 (SanJ4211_0692) - 716631..717629 (+) 999 WP_021001528.1 glycosyltransferase family 4 protein -
  SanJ4211_RS03600 (SanJ4211_0693) - 717631..718944 (+) 1314 WP_057489614.1 glycosyltransferase family 4 protein -
  SanJ4211_RS03605 (SanJ4211_0694) - 718971..719312 (+) 342 WP_021001530.1 hypothetical protein -
  SanJ4211_RS03610 (SanJ4211_0695) micA 719602..720303 (+) 702 WP_021001531.1 response regulator YycF Regulator
  SanJ4211_RS03615 (SanJ4211_0696) micB 720296..721648 (+) 1353 WP_021001532.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SanJ4211_RS03620 (SanJ4211_0697) vicX 721651..722454 (+) 804 WP_021001533.1 MBL fold metallo-hydrolase Regulator
  SanJ4211_RS03625 - 722463..722823 (+) 361 Protein_693 YbaN family protein -
  SanJ4211_RS03630 (SanJ4211_0700) rnc 723205..723903 (+) 699 WP_021001534.1 ribonuclease III -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51362.59 Da        Isoelectric Point: 4.6876

>NTDB_id=157702 SanJ4211_RS03615 WP_021001532.1 720296..721648(+) (micB) [Streptococcus anginosus strain J4211]
MIDNIRQFIVSKDFVFVLLILGFILVITLLSLENRRDNVRIRQLNQKVKDLIAGNYSEILDVQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTDTQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=157702 SanJ4211_RS03615 WP_021001532.1 720296..721648(+) (micB) [Streptococcus anginosus strain J4211]
ATGATTGATAATATTAGACAATTTATTGTATCAAAAGACTTTGTATTTGTTTTACTTATTTTAGGGTTCATCTTGGTGAT
TACCTTGCTTTCCTTGGAAAACAGGCGTGACAACGTTCGTATTCGCCAATTGAATCAAAAAGTAAAAGATTTAATTGCAG
GCAATTACTCAGAAATTTTAGATGTACAAGGTGGTCCAGAAATTACGGATATTACCAACAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGCGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATTAATGATATGGCGACCAAGCAGTTGGGGGTCAAAGAATCCGAAG
CACGAAAGATGAATATCTTAAAACTGTTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAA
TTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTTCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGTTACACGATACAACGGAGCAGGAAAAAGAAGAGCGTGAGCGGAGACTGTTTGTTT
CGAATGTCAGTCACGAATTACGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCACTAGATGAAGGTGCCTTATCA
GAACCAGTCGCACCGGATTTCATCAAGGTTTCATTAGACGAGACAAATCGGATGATGCGCATGGTTTCGGACTTGCTGAG
TTTGTCACGTATTGACAATGCAACCAGTCATTTGGATATTGAATTGACGAATTTTACAGCTTTTATCACCTTTATTTTGA
ACCGTTTTGATAAAATCAGAAGCCAGAATGATGATAAAAAGTATGAAATTATACGAGATTATCCGATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
TAAAATTACGGTCAGTATGAAAACGACGGATACCCAAATGATTTTGTCGATTTCAGATGAAGGCTTAGGAATTCCTAAAA
AAGATTTGCCGAAAATTTTTGATAGATTTTATCGTGTAGACAAAGCAAGAAGTCGCGCCCAAGGTGGATCCGGACTGGGC
TTAGCCATTGCCAAAGAGATTATCAAGCAACATAACGGCTTTATCTGGGCAAAGAGCGAGTACGGCAAAGGCTCGACGTT
TACAATCGTTCTGCCATATGACAAAGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGATAG

Domains

Predicted by InterproScan.

PAS fold (PAS)

(95-198)

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(324-434)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

80.866

97.556

0.789
  vicK Streptococcus mutans UA159

71.883

90.889

0.653

Multiple sequence alignment