Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   SanJ4211_RS02470 Genome accession   NZ_CP012805
Coordinates   476596..477306 (-) Length   236 a.a.
NCBI ID   WP_021001389.1    Uniprot ID   -
Organism   Streptococcus anginosus strain J4211     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 471596..482306
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4211_RS02455 (SanJ4211_0461) - 471989..473113 (+) 1125 WP_003028351.1 AI-2E family transporter -
  SanJ4211_RS02460 (SanJ4211_0462) - 473337..474986 (+) 1650 WP_021001387.1 phosphoenolpyruvate carboxykinase (ATP) -
  SanJ4211_RS02465 (SanJ4211_0463) - 475103..476443 (+) 1341 WP_021001388.1 hemolysin family protein -
  SanJ4211_RS02470 (SanJ4211_0464c) treR 476596..477306 (-) 711 WP_021001389.1 trehalose operon repressor Regulator
  SanJ4211_RS02475 (SanJ4211_0466) treP 477485..478976 (+) 1492 Protein_462 PTS system trehalose-specific EIIBC component -
  SanJ4211_RS10325 (SanJ4211_0467) - 479043..479498 (+) 456 Protein_463 PTS sugar transporter subunit IIA -
  SanJ4211_RS02480 (SanJ4211_0468) - 479705..481336 (+) 1632 WP_081026659.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27675.76 Da        Isoelectric Point: 9.8121

>NTDB_id=157691 SanJ4211_RS02470 WP_021001389.1 476596..477306(-) (treR) [Streptococcus anginosus strain J4211]
MKKYKQIFKLLEQDILNEKYQINDYLPSEHELVQTYKVSRDTIRKSLDLLQKAGLIQKRRGKGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSINREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=157691 SanJ4211_RS02470 WP_021001389.1 476596..477306(-) (treR) [Streptococcus anginosus strain J4211]
ATGAAAAAATATAAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATAAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGACCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAAGGAGAGGTAAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
CCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAACCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACTAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTTGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTCTCCAAACGGCAAAAATGA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

63.983

100

0.64

Multiple sequence alignment