Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ACH32_RS03375 Genome accession   NZ_CP012756
Coordinates   621290..622006 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain JS395     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 616290..627006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACH32_RS03345 (ACH32_03335) - 616397..617023 (+) 627 WP_000522375.1 nitroreductase family protein -
  ACH32_RS03350 (ACH32_03340) - 617493..618278 (+) 786 Protein_625 carbon-nitrogen family hydrolase -
  ACH32_RS15620 hld 618878..618958 (-) 81 WP_000046022.1 delta-hemolysin -
  ACH32_RS03360 (ACH32_03350) agrB 619248..619817 (+) 570 WP_001105708.1 accessory gene regulator AgrB -
  ACH32_RS03365 (ACH32_03355) agrD 619814..619954 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  ACH32_RS03370 (ACH32_03360) agrC 619979..621271 (+) 1293 WP_001657119.1 quorum-sensing sensor histidine kinase AgrC -
  ACH32_RS03375 (ACH32_03365) agrA 621290..622006 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ACH32_RS03380 (ACH32_03370) - 622078..622185 (+) 108 WP_031785433.1 hypothetical protein -
  ACH32_RS03385 (ACH32_03375) - 622375..623334 (-) 960 WP_001253296.1 carbohydrate kinase family protein -
  ACH32_RS03390 (ACH32_03380) - 623331..624815 (-) 1485 WP_000141419.1 sucrose-6-phosphate hydrolase -
  ACH32_RS03395 (ACH32_03385) - 624964..625914 (-) 951 WP_000790314.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=157611 ACH32_RS03375 WP_000688492.1 621290..622006(+) (agrA) [Staphylococcus aureus strain JS395]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=157611 ACH32_RS03375 WP_000688492.1 621290..622006(+) (agrA) [Staphylococcus aureus strain JS395]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAGGATGATCCAGCAGAATTAAGAACACGTATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCTGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACTAAGTCACACAGACTCATTGCGCATTTAGACAATCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGCTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATTG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment