Detailed information NTG0157419

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC17_RS01510
• Genome accession: NZ_CP012739
• Coordinates: 306122..307129 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_017
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 301122..312129

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC17_RS01480 (FORC17_0262)	zapB	301246..301488 (-)	243	WP_011079328.1	cell division protein ZapB	-
FORC17_RS01485 (FORC17_0263)	rraA	301710..302231 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
FORC17_RS01490 (FORC17_0264)	-	302307..303224 (-)	918	WP_065090045.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC17_RS01495 (FORC17_0265)	hslU	303390..304721 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
FORC17_RS01500 (FORC17_0266)	hslV	304749..305303 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
FORC17_RS01505 (FORC17_0267)	-	305455..306012 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
FORC17_RS01510 (FORC17_0268)	cytR	306122..307129 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FORC17_RS01515 (FORC17_0269)	priA	307358..309562 (-)	2205	WP_045620693.1	primosomal protein N'	-
FORC17_RS01520 (FORC17_0270)	rpmE	309843..310064 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
FORC17_RS01525 (FORC17_0271)	-	310343..311620 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
FORC17_RS01530 (FORC17_0272)	metJ	311707..312024 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=157419 FORC17_RS01510 WP_011079334.1 306122..307129(-) (cytR) [Vibrio vulnificus strain FORC_017]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=157419 FORC17_RS01510 WP_011079334.1 306122..307129(-) (cytR) [Vibrio vulnificus strain FORC_017]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCACTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875