Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   AN924_RS07890 Genome accession   NZ_CP012731
Coordinates   1558120..1559169 (+) Length   349 a.a.
NCBI ID   WP_009910567.1    Uniprot ID   A0A7Y6RPS3
Organism   Streptococcus suis strain 90-1330     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1553120..1564169
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AN924_RS07855 (AN924_16320) - 1553441..1554535 (+) 1095 WP_024394990.1 sensor histidine kinase -
  AN924_RS07860 (AN924_16330) - 1554532..1555134 (+) 603 WP_004194738.1 response regulator transcription factor -
  AN924_RS07865 (AN924_16340) - 1555434..1555652 (+) 219 WP_004194736.1 YqgQ family protein -
  AN924_RS07870 (AN924_16350) - 1555652..1556038 (+) 387 WP_004194735.1 rhodanese-like domain-containing protein -
  AN924_RS07875 (AN924_16360) - 1556095..1556817 (+) 723 WP_013730502.1 hypothetical protein -
  AN924_RS07880 (AN924_16370) rsmD 1557116..1557655 (+) 540 WP_009910569.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  AN924_RS07885 (AN924_16380) coaD 1557645..1558133 (+) 489 WP_002939048.1 pantetheine-phosphate adenylyltransferase -
  AN924_RS07890 (AN924_16390) sepM 1558120..1559169 (+) 1050 WP_009910567.1 SepM family pheromone-processing serine protease Regulator
  AN924_RS07895 (AN924_16400) - 1559357..1559998 (+) 642 WP_004194595.1 YutD family protein -
  AN924_RS07900 (AN924_16410) rlmN 1560007..1561119 (+) 1113 WP_004194597.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  AN924_RS07905 (AN924_16420) - 1561116..1561643 (+) 528 WP_004194600.1 VanZ family protein -
  AN924_RS07910 (AN924_16430) nadE 1562517..1563341 (-) 825 WP_004194617.1 ammonia-dependent NAD(+) synthetase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37733.77 Da        Isoelectric Point: 4.6112

>NTDB_id=157372 AN924_RS07890 WP_009910567.1 1558120..1559169(+) (sepM) [Streptococcus suis strain 90-1330]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIARFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALTDDSTFKKVLNIADTVVSINGK
TFESSPDLVKYVSGLEVGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSVPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKKNPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=157372 AN924_RS07890 WP_009910567.1 1558120..1559169(+) (sepM) [Streptococcus suis strain 90-1330]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATCTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAGGAGTATTTCCGTATAGCACGGTTTTACAT
GGAAACTTCGCAAAATATGGCGAAGTATCAAGGATTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTGCTTGCCTTGACGGATGATTCAACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGGTTAAATATGTGAGTGGCTTGGAGGTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTATCTAATGGCAAAAACGGAATAGGCATCACTCTCGTAG
ACCATACAGAGGTTCAAAGTTCGGTTCCAATTGATTTCCAAACGGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGGGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATTTTTTTTG
TACCAAACAATCCAGTTGATGTAGAAGTTTTGAAGAAAAACCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCA
GCCGAGAAAGCAGGTCTAGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACGAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7Y6RPS3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.519

99.427

0.602


Multiple sequence alignment