Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A9E77_RS13260 Genome accession   NZ_CP015932
Coordinates   2982543..2983334 (-) Length   263 a.a.
NCBI ID   WP_010948290.1    Uniprot ID   Q5ZSC9
Organism   Legionella pneumophila strain C1_S     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2977543..2988334
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9E77_RS13250 (A9E77_13250) legS1 2978712..2979869 (-) 1158 WP_010948288.1 Dot/Icm T4SS effector LegS1 -
  A9E77_RS13255 (A9E77_13255) dacB 2980658..2982451 (-) 1794 WP_010948289.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  A9E77_RS13260 (A9E77_13260) spo0J 2982543..2983334 (-) 792 WP_010948290.1 ParB/RepB/Spo0J family partition protein Regulator
  A9E77_RS13265 (A9E77_13265) ceg33 2983451..2983948 (-) 498 WP_010948291.1 Dot/Icm T4SS effector Ceg33 -
  A9E77_RS13270 (A9E77_13270) - 2984121..2984870 (-) 750 WP_010948292.1 CPBP family glutamic-type intramembrane protease -
  A9E77_RS13275 (A9E77_13275) rsmB 2984867..2986150 (-) 1284 WP_010948293.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  A9E77_RS13280 (A9E77_13280) fmt 2986147..2987091 (-) 945 WP_010948294.1 methionyl-tRNA formyltransferase -
  A9E77_RS13285 (A9E77_13285) def 2987088..2987600 (-) 513 WP_010948295.1 peptide deformylase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30090.26 Da        Isoelectric Point: 5.7320

>NTDB_id=156908 A9E77_RS13260 WP_010948290.1 2982543..2983334(-) (spo0J) [Legionella pneumophila strain C1_S]
MQTRFTYLPVTSLQAGQYQPRQDFNVTELQELAQSISSQGLIEPLVVRPIAKERYEIIAGERRWRAAKLAGLNEVPCLIG
DYSDQQACALTLIENIQRQDLNLIEEATGYKRLIEEFHYHQDEIAALVGKSRSHVANILRLLTLTDKVKQLVRDKVLSFG
HARVLVGLNPEQQEMFAQQIIGEEWSVRHLEQEIKSYKNKDINSPKNPRKDRDIERLQTILAEQVGAPVQIVNDGEDGGW
LKVKFFDNDTLAGLLERLGLRYD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=156908 A9E77_RS13260 WP_010948290.1 2982543..2983334(-) (spo0J) [Legionella pneumophila strain C1_S]
ATGCAAACCCGATTTACTTATTTACCTGTTACAAGCCTGCAGGCAGGTCAGTATCAACCCAGGCAAGATTTTAATGTAAC
GGAGTTACAGGAATTGGCTCAGTCAATTTCTTCCCAGGGTTTAATTGAACCTTTGGTGGTAAGACCCATAGCAAAAGAGC
GATATGAAATTATTGCAGGGGAAAGAAGGTGGCGTGCGGCCAAATTGGCGGGATTAAATGAAGTCCCTTGTTTGATTGGA
GATTATAGTGATCAACAGGCATGTGCTCTCACTTTAATCGAAAATATTCAACGTCAGGATTTGAATTTAATTGAGGAAGC
CACTGGTTATAAGCGTTTAATTGAAGAATTCCATTATCATCAGGACGAGATCGCAGCGTTGGTAGGTAAATCTCGTAGCC
ATGTCGCAAATATTCTTCGTCTCCTTACCTTGACAGATAAGGTTAAACAGTTGGTTCGAGACAAAGTGTTATCCTTTGGA
CATGCTCGTGTATTGGTTGGTTTAAATCCTGAACAACAAGAAATGTTTGCTCAGCAGATTATTGGAGAGGAATGGTCTGT
CAGACACTTAGAGCAAGAAATTAAATCTTATAAAAATAAAGATATAAATAGCCCAAAAAACCCCAGAAAAGACAGAGATA
TTGAGCGGTTACAGACTATCCTGGCTGAACAAGTGGGGGCTCCTGTACAAATTGTAAACGATGGCGAAGACGGAGGTTGG
TTAAAAGTAAAATTTTTTGATAATGATACCCTTGCAGGGCTTTTGGAGCGATTGGGCTTGAGATATGATTAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-96)

HTH domain found in ParB protein (HTH_ParB)

(146-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5ZSC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

38.077

98.859

0.376