Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SanJ4206_RS07640 Genome accession   NZ_CP012719
Coordinates   1569609..1571375 (-) Length   588 a.a.
NCBI ID   WP_003027425.1    Uniprot ID   A0AAI9NHM4
Organism   Streptococcus anginosus strain J4206     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1564609..1576375
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SanJ4206_RS07620 (SanJ4206_1476) - 1565473..1566870 (+) 1398 WP_003027414.1 glycoside hydrolase family 1 protein -
  SanJ4206_RS07625 (SanJ4206_1477c) - 1567004..1567324 (-) 321 WP_003027417.1 PTS cellobiose transporter subunit IIA -
  SanJ4206_RS07630 (SanJ4206_1478c) - 1567335..1567649 (-) 315 WP_022525145.1 PTS cellobiose transporter subunit IIB -
  SanJ4206_RS07635 (SanJ4206_1479c) rcrQ 1567859..1569619 (-) 1761 WP_003027423.1 ABC transporter ATP-binding protein Regulator
  SanJ4206_RS07640 (SanJ4206_1480c) rcrP 1569609..1571375 (-) 1767 WP_003027425.1 ABC transporter ATP-binding protein Regulator
  SanJ4206_RS07645 (SanJ4206_1481c) - 1571368..1571826 (-) 459 WP_004224071.1 MarR family winged helix-turn-helix transcriptional regulator -
  SanJ4206_RS07650 (SanJ4206_1482c) - 1571983..1572393 (-) 411 WP_022525146.1 peptide deformylase -
  SanJ4206_RS07655 (SanJ4206_1483c) scrK 1572458..1573357 (-) 900 WP_037582535.1 fructokinase ScrK -
  SanJ4206_RS07660 (SanJ4206_1484c) - 1573632..1575530 (-) 1899 WP_022525147.1 sucrose-specific PTS transporter subunit IIBC -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65350.02 Da        Isoelectric Point: 6.1196

>NTDB_id=156791 SanJ4206_RS07640 WP_003027425.1 1569609..1571375(-) (rcrP) [Streptococcus anginosus strain J4206]
MFKLFKRLTAKEVGMIVISILFTCLTVYLELEVPTYISKITELLQTRGTVVSDLWNPGLKMIGLSFASFLSAVVVGFIAA
RLAASFTTSLRSDIFNRVLDYSDAEIKRFSIPSLLTRTTNDLTQIQLMITMGLQVVTRGPIMAIWAITKIIGKSEYWLWA
VIVAVIVNIIMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDDKFAGANDEVTRLNLFVSRLMAI
LNPIMMGISSGLTLAIYWIGAYLIQDAALPERLPIFSDMVVFMSYAMQVVMGFMLMAALFIILPRTLVSAGRINEVLDLY
STIESPEHPKEAKDIKGEVVFDNVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLISLIPRFYDVTEGRILVD
GVNVKDYQLEDLHNKVGYIPQKAVLFSGDIKSNLDFGQSNESPLDDEKMWAALDLAQAKSFVEEKEGGLHSEVAQSGTNF
SGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILREELAKKVKDTTRLIVAQRISTIMDADQILVLDKGKVVGQGT
HKELLATNAVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=156791 SanJ4206_RS07640 WP_003027425.1 1569609..1571375(-) (rcrP) [Streptococcus anginosus strain J4206]
ATGTTTAAATTATTTAAACGTTTAACTGCTAAAGAAGTAGGGATGATTGTCATTAGTATCTTGTTTACTTGTTTAACAGT
TTATTTGGAATTAGAGGTTCCAACTTATATTTCAAAAATTACGGAACTCCTACAGACGAGAGGGACAGTAGTTTCTGACC
TGTGGAATCCAGGTTTGAAAATGATTGGCTTATCTTTTGCGAGCTTTCTAAGTGCAGTAGTAGTTGGCTTTATAGCGGCT
AGATTAGCAGCTAGCTTTACGACGAGTTTGCGGTCGGATATTTTCAATCGTGTACTGGATTATTCAGATGCCGAAATTAA
GAGATTTTCTATTCCGAGTCTTTTGACCCGGACAACCAATGATCTTACGCAAATTCAACTTATGATTACAATGGGCTTGC
AAGTTGTGACTCGTGGACCGATTATGGCGATTTGGGCGATTACGAAAATCATTGGGAAATCAGAATATTGGCTCTGGGCA
GTTATTGTGGCGGTAATTGTGAATATTATCATGACAACAGTTCTGATGACGCTTGCCTTTCCAAAGCAATCCGTTATTCA
ACGGTTGACTGATAAGTTGAACAGTATTACGCGTGAAAGTCTAACAGGGATTCGTGTTGTTCGGGCTTACAATGCTGAAG
ACTATCAAGATGACAAGTTTGCAGGAGCCAATGATGAAGTGACTCGTTTGAATCTCTTTGTCAGTCGTCTCATGGCAATT
TTAAATCCAATTATGATGGGGATTTCGAGCGGATTGACTTTAGCGATTTATTGGATTGGGGCTTACTTGATTCAAGACGC
AGCTTTACCAGAGCGATTGCCTATCTTTAGTGATATGGTAGTCTTTATGTCTTATGCCATGCAAGTGGTAATGGGCTTCA
TGCTCATGGCGGCTCTTTTTATCATTCTACCTCGTACCTTGGTGTCTGCTGGACGGATTAATGAAGTGCTTGATTTATAT
TCAACGATTGAGTCTCCAGAACACCCTAAAGAAGCTAAAGATATTAAAGGAGAAGTGGTATTTGACAATGTGTCTTTCCG
CTATGCTAAAAACTCTGAGGCTGTCATTGAGCATGTCAGCTTTACAGCAAAAGCAGGTGAAACCGTAGCTTTCATTGGTT
CAACCGGTTCTGGGAAATCTACTCTAATTAGCTTAATTCCTCGTTTTTATGATGTGACAGAAGGAAGAATTTTAGTAGAC
GGCGTAAACGTCAAAGATTATCAGCTAGAAGATTTGCATAATAAAGTTGGCTACATTCCACAAAAAGCTGTCCTCTTCTC
TGGTGATATAAAGAGTAATTTGGACTTTGGACAAAGCAATGAAAGTCCATTGGATGATGAAAAAATGTGGGCTGCGTTGG
ACTTGGCACAAGCGAAATCATTTGTTGAAGAAAAAGAAGGTGGTCTGCACTCAGAGGTCGCACAAAGCGGGACCAATTTC
TCTGGTGGGCAAAAGCAACGTTTGGCAATTGCGCGTGCGCTTGCTCGCAAGCCTGAAATTTTGATTTTTGATGATTCATT
TTCAGCGCTGGACTATAAGACAGACCGCATTTTGCGGGAAGAATTAGCGAAAAAAGTGAAGGACACAACCAGATTGATTG
TGGCGCAGCGGATTTCAACGATTATGGATGCTGATCAGATTTTGGTACTGGATAAAGGAAAAGTAGTCGGTCAGGGTACT
CATAAAGAATTGCTGGCAACGAACGCAGTTTACCAAGAAATTGCTTACTCACAATTATCAAAGGAGGAATTGGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(357-506)

ABC transporter transmembrane region (ABC_membrane)

(17-291)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

71

100

0.724

Multiple sequence alignment