Detailed information NTG0156641

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: AOD58_RS05680
• Genome accession: NZ_CP012696
• Coordinates: 1083251..1084210 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM1285
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1078251..1089210

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AOD58_RS05655 (AOD58_05650)	neuC	1078816..1079931 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
AOD58_RS09175 (AOD58_05655)	-	1079928..1080866 (+)	939	Protein_1085	beta-1,4-N-acetylgalactosaminyltransferase	-
AOD58_RS09180 (AOD58_05660)	-	1080876..1081538 (+)	663	WP_002881429.1	cytidylyltransferase domain-containing protein	-
AOD58_RS05670 (AOD58_05665)	-	1081533..1082384 (-)	852	WP_043020460.1	glycosyltransferase	-
AOD58_RS05675 (AOD58_05670)	waaV	1082368..1083192 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
AOD58_RS05680 (AOD58_05675)	waaF	1083251..1084210 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
AOD58_RS05685 (AOD58_05680)	gmhA	1084191..1084751 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
AOD58_RS05690 (AOD58_05685)	rfaE1	1084748..1086133 (-)	1386	WP_002890180.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
AOD58_RS05695 (AOD58_05690)	rfaD	1086126..1087079 (-)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
AOD58_RS05700 (AOD58_05695)	gmhB	1087080..1087640 (-)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
AOD58_RS05705 (AOD58_05700)	-	1087722..1088024 (+)	303	WP_002852762.1	c-type cytochrome	-
AOD58_RS05710 (AOD58_05705)	ccoS	1088047..1088253 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=156641 AOD58_RS05680 WP_002875425.1 1083251..1084210(+) (waaF) [Campylobacter jejuni strain RM1285]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=156641 AOD58_RS05680 WP_002875425.1 1083251..1084210(+) (waaF) [Campylobacter jejuni strain RM1285]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1