Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | AOD58_RS05330 | Genome accession | NZ_CP012696 |
| Coordinates | 1013076..1013378 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain RM1285 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1008076..1018378
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOD58_RS05305 (AOD58_05300) | rpsR | 1008439..1008699 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| AOD58_RS05310 (AOD58_05305) | lon | 1008759..1011134 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| AOD58_RS05315 (AOD58_05310) | - | 1011151..1011798 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| AOD58_RS05320 (AOD58_05315) | fliW | 1011959..1012348 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| AOD58_RS05325 (AOD58_05320) | proC | 1012348..1013079 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| AOD58_RS05330 (AOD58_05325) | ctsT | 1013076..1013378 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| AOD58_RS05335 (AOD58_05330) | - | 1013375..1014037 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| AOD58_RS05340 (AOD58_05335) | - | 1014034..1014486 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| AOD58_RS05345 (AOD58_05340) | hemD | 1014483..1015112 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| AOD58_RS05350 (AOD58_05345) | thiE | 1015090..1015722 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| AOD58_RS05355 (AOD58_05350) | thiD | 1015712..1016524 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| AOD58_RS05360 (AOD58_05355) | - | 1016521..1017207 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| AOD58_RS05365 (AOD58_05360) | - | 1017204..1017965 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=156639 AOD58_RS05330 WP_002853046.1 1013076..1013378(+) (ctsT) [Campylobacter jejuni strain RM1285]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=156639 AOD58_RS05330 WP_002853046.1 1013076..1013378(+) (ctsT) [Campylobacter jejuni strain RM1285]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |