Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilJ   Type   Machinery gene
Locus tag   AN159_RS01735 Genome accession   NZ_CP012694
Coordinates   309739..310728 (+) Length   329 a.a.
NCBI ID   WP_050177628.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 331401     
Function   type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 304739..315728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AN159_RS01710 (AN159_01720) - 304909..305418 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  AN159_RS01715 (AN159_01725) - 305965..306552 (-) 588 WP_002246116.1 superoxide dismutase -
  AN159_RS01720 (AN159_01730) dnaB 306715..308121 (+) 1407 WP_069972263.1 replicative DNA helicase -
  AN159_RS01725 (AN159_01735) pilH 308430..309107 (+) 678 WP_002246118.1 GspH/FimT family pseudopilin Machinery gene
  AN159_RS01730 (AN159_01740) pilV 309131..309742 (+) 612 WP_002249636.1 type IV pilus modification protein PilV Machinery gene
  AN159_RS01735 (AN159_01745) pilJ 309739..310728 (+) 990 WP_050177628.1 PilW family protein Machinery gene
  AN159_RS01740 (AN159_01750) pilK 310707..311303 (+) 597 WP_002246121.1 pilus assembly PilX family protein Machinery gene
  AN159_RS01745 (AN159_01755) pilX 311308..311781 (+) 474 WP_002246122.1 PilX family type IV pilin Machinery gene
  AN159_RS01750 (AN159_01770) - 313438..313866 (-) 429 Protein_331 AzlC family ABC transporter permease -
  AN159_RS01755 (AN159_01775) dut 314014..314466 (+) 453 WP_002245956.1 dUTP diphosphatase -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36099.06 Da        Isoelectric Point: 9.1663

>NTDB_id=156586 AN159_RS01735 WP_050177628.1 309739..310728(+) (pilJ) [Neisseria meningitidis strain 331401]
MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFTSRKLNDAANERLAIQQDLRNAATLIVRDARMAGGFG
CFNMSEHIGSDVVSNVVQKNPLFSLKKRNSTNKLIPITESSNIGYPGFTQRLNALIFQYGIDDVNASADTTVVSSCAKIA
KPGKKISTLQEAKSALQITNDDKQNGNITRQRHVVNAYAVGRIAGEEGLFRFQLNDDGQWGNPQLLVKKINKMDIRYIYL
LVENPGIPPTNSPRYIYGCPEDDDAGKEETFKYTDKFDSSTNAVTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRG
GNVCANRTL

Nucleotide


Download         Length: 990 bp        

>NTDB_id=156586 AN159_RS01735 WP_050177628.1 309739..310728(+) (pilJ) [Neisseria meningitidis strain 331401]
ATGAGACGTAAAATGCTAAACGTACCAAAAGGCAGTTATGATGGTATGAAGGGTTTTACCATTATTGAATTTTTGGTTGC
GGGCATGCTCAGTATGATTGTCCTGATGGCGGTCGGATCGAGTTACTTCACGTCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCTATTCAACAGGATTTGCGGAATGCGGCAACATTAATTGTCCGCGATGCAAGAATGGCGGGGGGCTTCGGT
TGTTTCAATATGTCTGAGCATATCGGAAGTGATGTTGTTTCCAATGTGGTGCAAAAAAACCCTCTTTTTTCCTTAAAAAA
AAGGAACAGTACAAATAAACTTATCCCCATAACGGAATCTTCAAATATCGGATATCCGGGTTTTACCCAGCGCCTTAACG
CATTGATTTTCCAATACGGAATCGATGATGTTAATGCAAGCGCCGATACTACCGTCGTCAGCAGCTGTGCCAAAATAGCA
AAACCGGGTAAGAAAATATCTACCTTGCAAGAAGCAAAGAGTGCATTACAGATTACTAATGATGATAAACAAAATGGAAA
TATCACCCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCGGTGAGGAAGGTTTGTTCCGCTTCCAAT
TGAATGATGATGGGCAGTGGGGCAATCCTCAGTTGTTGGTTAAAAAGATTAATAAAATGGATATACGGTATATCTATCTT
CTCGTGGAAAATCCTGGTATACCGCCTACCAATTCTCCCCGGTATATTTACGGTTGCCCTGAAGATGACGATGCCGGCAA
AGAGGAAACATTCAAATATACGGATAAATTCGACAGCTCCACAAATGCTGTTACGCCCGCCGGGGTGGAGGTTTTATTGA
GTAGCGGTACTGATACCAAGATTGCCGCTTCTTCAGACAATCATATTTATGCTTACCGTATCGATGCGACAATACGCGGG
GGAAATGTATGCGCAAACAGAACACTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilJ Neisseria gonorrhoeae MS11

76.807

100

0.775

Multiple sequence alignment