Detailed information NTG0156505

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: FORC24_RS26040
• Genome accession: NZ_CP012691
• Coordinates: 5110513..5111862 (-)
• Length: 449 a.a.
• NCBI ID: WP_000225363.1
• Uniprot ID: -
• Organism: Bacillus cereus strain FORC_024
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5105513..5116862

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC24_RS26020 (FORC24_4944)	secA	5105838..5108345 (-)	2508	WP_000579385.1	preprotein translocase subunit SecA	-
FORC24_RS26025 (FORC24_4945)	raiA	5108620..5109162 (-)	543	WP_000671185.1	ribosome-associated translation inhibitor RaiA	-
FORC24_RS26030 (FORC24_4946)	cspC	5109485..5109682 (-)	198	WP_001990088.1	cold shock protein CspC	-
FORC24_RS26035 (FORC24_4947)	-	5109809..5110513 (-)	705	WP_013142274.1	ComF family protein	-
FORC24_RS26040 (FORC24_4948)	comFA	5110513..5111862 (-)	1350	WP_000225363.1	ATP-dependent helicase ComFA	Machinery gene
FORC24_RS26045 (FORC24_4949)	-	5111990..5113402 (-)	1413	WP_000499478.1	C40 family peptidase	-
FORC24_RS26050 (FORC24_4950)	-	5113551..5113865 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
FORC24_RS26055 (FORC24_4951)	-	5114038..5114880 (-)	843	WP_000684725.1	DegV family protein	-
FORC24_RS26060 (FORC24_4952)	-	5115117..5115752 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51202.09 Da
• Isoelectric Point: 9.9910

>NTDB_id=156505 FORC24_RS26040 WP_000225363.1 5110513..5111862(-) (comFA) [Bacillus cereus strain FORC_024]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECTVLVRGIAERKREKNSNLLQWNGTLSTGQNLVAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVVALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMYLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=156505 FORC24_RS26040 WP_000225363.1 5110513..5111862(-) (comFA) [Bacillus cereus strain FORC_024]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATCGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTACTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGTGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGTGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTACTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGTACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (313-408)

• DEAD/DEAH box helicase (DEAD) (117-256)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.392	93.096	0.488