Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | CjjRM3196_RS05865 | Genome accession | NZ_CP012690 |
| Coordinates | 1121085..1122035 (+) | Length | 316 a.a. |
| NCBI ID | WP_002853794.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain RM3196 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1116085..1127035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CjjRM3196_RS05840 (CjjRM3196_1157) | neuB | 1116584..1117624 (+) | 1041 | WP_002852665.1 | N-acetylneuraminate synthase | - |
| CjjRM3196_RS05845 (CjjRM3196_1158) | neuC | 1117621..1118739 (+) | 1119 | WP_002852786.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| CjjRM3196_RS05850 (CjjRM3196_1159) | - | 1118736..1119401 (+) | 666 | WP_002852731.1 | cytidylyltransferase domain-containing protein | - |
| CjjRM3196_RS05855 (CjjRM3196_1160) | - | 1119389..1120222 (+) | 834 | WP_002854028.1 | CatB-related O-acetyltransferase | - |
| CjjRM3196_RS05860 (CjjRM3196_1161) | - | 1120214..1121026 (-) | 813 | WP_002854116.1 | glycosyltransferase family 2 protein | - |
| CjjRM3196_RS05865 (CjjRM3196_1162) | waaF | 1121085..1122035 (+) | 951 | WP_002853794.1 | glycosyltransferase family 9 protein | Regulator |
| CjjRM3196_RS05870 (CjjRM3196_1163) | - | 1122021..1122784 (-) | 764 | Protein_1122 | glycosyltransferase family 25 protein | - |
| CjjRM3196_RS05875 (CjjRM3196_1164) | gmhA | 1122784..1123344 (-) | 561 | WP_002787744.1 | D-sedoheptulose 7-phosphate isomerase | - |
| CjjRM3196_RS05880 (CjjRM3196_1165) | rfaE1 | 1123341..1124726 (-) | 1386 | WP_002853608.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| CjjRM3196_RS05885 (CjjRM3196_1166) | rfaD | 1124719..1125672 (-) | 954 | WP_002853798.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| CjjRM3196_RS05890 (CjjRM3196_1167) | gmhB | 1125673..1126233 (-) | 561 | WP_002853963.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| CjjRM3196_RS05895 (CjjRM3196_1168) | - | 1126315..1126617 (+) | 303 | WP_002852762.1 | c-type cytochrome | - |
| CjjRM3196_RS05900 (CjjRM3196_1169) | ccoS | 1126640..1126846 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 316 a.a. Molecular weight: 36225.73 Da Isoelectric Point: 10.2421
>NTDB_id=156448 CjjRM3196_RS05865 WP_002853794.1 1121085..1122035(+) (waaF) [Campylobacter jejuni subsp. jejuni strain RM3196]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENATLVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLTNI
Nucleotide
Download Length: 951 bp
>NTDB_id=156448 CjjRM3196_RS05865 WP_002853794.1 1121085..1122035(+) (waaF) [Campylobacter jejuni subsp. jejuni strain RM3196]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAACATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAACTAATATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
93.61 |
99.051 |
0.927 |