Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | AT729_RS05090 | Genome accession | NZ_CP015886 |
| Coordinates | 891582..894161 (-) | Length | 859 a.a. |
| NCBI ID | WP_002235021.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 38277 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 886582..899161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT729_RS05070 (AT729_00833) | - | 887506..888774 (+) | 1269 | WP_079889460.1 | Glu/Leu/Phe/Val family dehydrogenase | - |
| AT729_RS05075 (AT729_00834) | - | 888832..889638 (-) | 807 | WP_002212946.1 | DUF4198 domain-containing protein | - |
| AT729_RS05080 (AT729_00835) | - | 889983..890192 (+) | 210 | WP_002212949.1 | tautomerase family protein | - |
| AT729_RS05085 (AT729_00836) | - | 890281..891495 (+) | 1215 | WP_002220612.1 | pyridoxal phosphate-dependent aminotransferase | - |
| AT729_RS05090 (AT729_00837) | clpC | 891582..894161 (-) | 2580 | WP_002235021.1 | ATP-dependent chaperone ClpB | Regulator |
| AT729_RS05095 (AT729_00838) | trpS | 894421..895431 (+) | 1011 | WP_002235020.1 | tryptophan--tRNA ligase | - |
| AT729_RS05100 (AT729_00839) | - | 895499..896044 (+) | 546 | WP_079889461.1 | hypothetical protein | - |
| AT729_RS05105 (AT729_00840) | - | 896364..896729 (+) | 366 | WP_002220617.1 | Ag473 family lipoprotein | - |
| AT729_RS05115 (AT729_00841) | ppx | 896938..898446 (-) | 1509 | WP_002241759.1 | exopolyphosphatase | - |
Sequence
Protein
Download Length: 859 a.a. Molecular weight: 95158.61 Da Isoelectric Point: 5.3090
>NTDB_id=155604 AT729_RS05090 WP_002235021.1 891582..894161(-) (clpC) [Neisseria meningitidis strain 38277]
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLSSLPKVSGQGGD
IMPSRELQAVLNLMDKAATKRGDVYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNSGAAALLAHSGVNVPQVKQRLQQHLSSLPKVSGQGGD
IMPSRELQAVLNLMDKAATKRGDVYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVL
DLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYR
QYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAASR
VKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQID
EVKIKIEQAKRQGDLALASKLMYEDLEHLEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGER
DKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSE
YMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVM
TSNIGSQHIQQMGIQDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTVSD
AALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRLKFA
Nucleotide
Download Length: 2580 bp
>NTDB_id=155604 AT729_RS05090 WP_002235021.1 891582..894161(-) (clpC) [Neisseria meningitidis strain 38277]
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGTGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAGCAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAT
ATTATGCCTAGCCGTGAGCTGCAAGCTGTATTGAACTTGATGGACAAAGCCGCAACCAAGCGCGGCGATGTCTATATCGC
CAGCGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCAACCGGCAAAATTTTGAAAGAAGCCGGTGCGACCGAAC
AAAACATTAATGCCGCGATTGATGCGGTACGAGGAGGACAAAACGTGAATGATGCGAATGCCGAAGACCAACGCGATGCT
TTGAAAAAATACACACTTGATCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGATGATGAAAT
CCGCCGCGCGATTCAGGTATTGCAACGCCGTACCAAAAACAACCCCGTGCTGATTGGTGAGCCGGGTGTGGGTAAAACCG
CTATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGCAACAAACGCCTGCTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATATCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGACTTGGC
GAAAGACGATGGCAACACTCTGATTTTCATCGACGAAATTCATACCTTGGTTGGCGCAGGTAAAACCGACGGCGCGATGG
ACGCGGGCAATATGTTGAAACCGGCTTTGGCACGCGGCGAACTGCACTGTATCGGTGCGACCACCTTGGACGAATACCGC
CAATACATCGAAAAAGACGCGGCACTCGAACGCCGTTTCCAAAAAGTATTGGTTGGCGAGCCCAGCGTGGAAGACACCAT
CGCCATCTTGCGCGGTTTGCAGGAGCGTTATGAAATCCACCACGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAGGTGGTTTCCCGTATGACCGGCATTCCCGTATCCAAAATGATGGAAGGCGAACGC
GACAAACTGCTGAAAATGGAAGAAGTATTGCACCGCCGCGTGGTCGGACAGGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGCTCCGGTCTTGCCGATCCGAACAAGCCTTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAAACCGAGTTGTGTAAAGCCCTGGCAGGCTTTCTGTTCGACAGCGAAGATCATCTGATTCGCATCGATATGTCCGAA
TATATGGAAAAACACGCCGTTGCACGCCTGATCGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
CGAACAAGTGCGCCGCAAACCGTACAGCGTGATTCTGCTGGACGAAGTGGAAAAAGCCCATCCCGATGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGTTTGGATCAGGCAAACA
TCCGCAGCATTGCGAAAATCCAGCTCAAAGGTTTGGAAAAACGTTTGGAAAAACAAAACCTGCGCCTGACTGTTTCCGAT
GCCGCACTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
ATGCGATACGACAAATTAACCGCCAAATTCCAACAAGCCCTTGCAGAAGCTCAGAGTTTGGCGTTGGCTGCGGACGGCAG
CTATCTGGAAGCAGGCTTTGTGTTAAAAGCCCTGCTTGACGACCAAAACAGCGGTGCCGCCGCGTTGCTGGCGCATTCGG
GCGTGAACGTGCCGCAGGTGAAACAGCGTTTGCAGCAGCATTTGAGCAGCCTGCCGAAAGTGTCCGGCCAGGGCGGCGAT
ATTATGCCTAGCCGTGAGCTGCAAGCTGTATTGAACTTGATGGACAAAGCCGCAACCAAGCGCGGCGATGTCTATATCGC
CAGCGAACTTTTCCTGCTTGCCTTGGTGCAGCAGAACGATGCAACCGGCAAAATTTTGAAAGAAGCCGGTGCGACCGAAC
AAAACATTAATGCCGCGATTGATGCGGTACGAGGAGGACAAAACGTGAATGATGCGAATGCCGAAGACCAACGCGATGCT
TTGAAAAAATACACACTTGATCTGACCCAGCGCGCCCGCGACGGCAAACTTGACCCCGTTATCGGCCGTGATGATGAAAT
CCGCCGCGCGATTCAGGTATTGCAACGCCGTACCAAAAACAACCCCGTGCTGATTGGTGAGCCGGGTGTGGGTAAAACCG
CTATTGTTGAAGGCTTGGCGCAACGTATCGTCAACGGCGAAGTGCCTGAATCCCTGCGCAACAAACGCCTGCTGGTTCTG
GACTTGGCGGCTTTGATTGCCGGCGCGAAATATCGCGGCGAATTTGAAGAACGCTTGAAAGGCGTGTTGAACGACTTGGC
GAAAGACGATGGCAACACTCTGATTTTCATCGACGAAATTCATACCTTGGTTGGCGCAGGTAAAACCGACGGCGCGATGG
ACGCGGGCAATATGTTGAAACCGGCTTTGGCACGCGGCGAACTGCACTGTATCGGTGCGACCACCTTGGACGAATACCGC
CAATACATCGAAAAAGACGCGGCACTCGAACGCCGTTTCCAAAAAGTATTGGTTGGCGAGCCCAGCGTGGAAGACACCAT
CGCCATCTTGCGCGGTTTGCAGGAGCGTTATGAAATCCACCACGGTATCGATATTACCGACCCTGCTATCGTTGCCGCAG
CGGAGTTGAGCGACCGCTACATCACCGACCGCTTCCTGCCCGATAAAGCGATTGATTTGATTGACGAAGCCGCCAGCCGT
GTCAAGATGGAAAAAGAAACCAAGCCGGAAGCAATGGACAAAATCGACCGCCGTCTAATTCAGCTTCGGATGGAAAAGGC
GCACGTTGAAAAAGAAAAAGACGATGCCAGCAAAAAACGTTTGGAACTGATAGACGAGGAAATCAACGGTCTGCAAAAAG
AATACGCCGATTTAGACGAAATCTGGAAAGCCGAAAAAGCAATTTCAGACGGTGCTGCTAATATTAAGAAACAAATTGAC
GAAGTCAAAATTAAAATCGAACAGGCAAAACGGCAAGGCGATTTGGCACTGGCTTCAAAATTGATGTATGAAGATTTGGA
GCATTTGGAAAAACAGCGTGCAGCCGCCGAACGGGCAGATACGGACAGCACAAAACCGGCAAACAAACTCTTGCGTAATA
ATGTCGGCGCAGAGGAAATCGCAGAGGTGGTTTCCCGTATGACCGGCATTCCCGTATCCAAAATGATGGAAGGCGAACGC
GACAAACTGCTGAAAATGGAAGAAGTATTGCACCGCCGCGTGGTCGGACAGGACGAAGCCGTGCGTGCCGTGTCCGACGC
TATCCGCCGCAGCCGCTCCGGTCTTGCCGATCCGAACAAGCCTTACGGCAGCTTCCTGTTCTTGGGCCCGACCGGCGTGG
GTAAAACCGAGTTGTGTAAAGCCCTGGCAGGCTTTCTGTTCGACAGCGAAGATCATCTGATTCGCATCGATATGTCCGAA
TATATGGAAAAACACGCCGTTGCACGCCTGATCGGTGCGCCTCCGGGCTATGTCGGCTACGAAGAAGGCGGCTACCTGAC
CGAACAAGTGCGCCGCAAACCGTACAGCGTGATTCTGCTGGACGAAGTGGAAAAAGCCCATCCCGATGTGTTCAACATCC
TGCTGCAAGTATTGGATGACGGTCGTTTGACCGACGGGCAAGGCAGGACGGTAGATTTTAAAAATACCGTGATTGTGATG
ACTTCCAACATCGGCAGCCAGCACATCCAACAAATGGGCATTCAGGATTACGAAGCGGTAAAAGAAGTTGTGATGGAGGA
TGTGAAAGAACATTTCCGTCCTGAAATGATCAACCGCATCGACGAAGTGGTCGTGTTCCACGGTTTGGATCAGGCAAACA
TCCGCAGCATTGCGAAAATCCAGCTCAAAGGTTTGGAAAAACGTTTGGAAAAACAAAACCTGCGCCTGACTGTTTCCGAT
GCCGCACTGGACATCATCGCCAAAGCCGGTTTCGACCCGATTTACGGCGCACGTCCGCTCAAACGCGCCATCCAGTCGGA
AATCGAAAACCCGCTGGCAAAAGCCCTGCTTGCCGGAAACTATGCGCCCGAAAGCGAAATCAGGGTAGAAGCCGACGGCG
ACAGACTGAAATTTGCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.786 |
100 |
0.439 |
| clpC | Streptococcus pneumoniae TIGR4 |
38.87 |
100 |
0.409 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
38.685 |
100 |
0.404 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.118 |
80.792 |
0.381 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.206 |
79.162 |
0.374 |
| clpC | Streptococcus pneumoniae Rx1 |
44.35 |
82.421 |
0.366 |
| clpC | Streptococcus pneumoniae D39 |
44.35 |
82.421 |
0.366 |