Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | A6704_RS24985 | Genome accession | NZ_CP012584 |
| Coordinates | 5432127..5432651 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa strain PA_D25 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5427127..5437651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6704_RS24965 (A6704_24965) | pilR | 5428389..5429726 (+) | 1338 | WP_003110427.1 | two-component system response regulator PilR | Regulator |
| A6704_RS24970 (A6704_24970) | thiO | 5429772..5430866 (-) | 1095 | WP_033944813.1 | glycine oxidase ThiO | - |
| A6704_RS24975 (A6704_24975) | - | 5431006..5431506 (+) | 501 | WP_016254062.1 | GspH/FimT family pseudopilin | - |
| A6704_RS24980 (A6704_24980) | - | 5431629..5432117 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| A6704_RS24985 (A6704_24985) | pilV | 5432127..5432651 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| A6704_RS24990 (A6704_24990) | - | 5432660..5433475 (+) | 816 | WP_034027589.1 | PilW family protein | - |
| A6704_RS24995 (A6704_24995) | - | 5433472..5434077 (+) | 606 | WP_003116263.1 | pilus assembly PilX family protein | - |
| A6704_RS25000 (A6704_25000) | - | 5434091..5437567 (+) | 3477 | WP_034027586.1 | pilus assembly protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=155506 A6704_RS24985 WP_003116261.1 5432127..5432651(+) (pilV) [Pseudomonas aeruginosa strain PA_D25]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=155506 A6704_RS24985 WP_003116261.1 5432127..5432651(+) (pilV) [Pseudomonas aeruginosa strain PA_D25]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |