Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | A8714_RS23605 | Genome accession | NZ_CP015853 |
| Coordinates | 4645033..4645548 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli strain ATCC 43889 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4640033..4650548
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8714_RS23560 (A8714_23785) | csrA | 4640851..4641036 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| A8714_RS23590 (A8714_23815) | yqaB | 4642264..4642830 (+) | 567 | WP_000273311.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| A8714_RS23595 (A8714_23820) | yqaA | 4642827..4643254 (+) | 428 | Protein_4532 | YqaA family protein | - |
| A8714_RS23600 (A8714_23825) | gshA | 4643327..4644883 (+) | 1557 | WP_000611787.1 | glutamate--cysteine ligase | - |
| A8714_RS23605 (A8714_23830) | luxS | 4645033..4645548 (+) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| A8714_RS23610 (A8714_23835) | emrB | 4645612..4647150 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| A8714_RS23615 (A8714_23840) | emrA | 4647167..4648339 (-) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| A8714_RS23620 (A8714_23845) | emrR | 4648466..4648996 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| A8714_RS23625 (A8714_23850) | ygaH | 4649087..4649422 (-) | 336 | WP_000119747.1 | L-valine transporter subunit YgaH | - |
| A8714_RS23630 (A8714_23855) | ygaZ | 4649412..4650149 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=155388 A8714_RS23605 WP_001130215.1 4645033..4645548(+) (luxS) [Escherichia coli strain ATCC 43889]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=155388 A8714_RS23605 WP_001130215.1 4645033..4645548(+) (luxS) [Escherichia coli strain ATCC 43889]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |