Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   A8713_RS23825 Genome accession   NZ_CP015849
Coordinates   5510529..5511308 (-) Length   259 a.a.
NCBI ID   WP_018564690.1    Uniprot ID   A0ABV8TET7
Organism   Streptomyces sp. SAT1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5505529..5516308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8713_RS23815 (A8713_23800) - 5507459..5508208 (+) 750 WP_064535619.1 GNAT family N-acetyltransferase -
  A8713_RS23820 (A8713_23805) - 5508279..5510270 (+) 1992 WP_064535620.1 ATP-dependent DNA helicase -
  A8713_RS23825 (A8713_23810) dinR/lexA 5510529..5511308 (-) 780 WP_018564690.1 transcriptional repressor LexA Regulator
  A8713_RS23830 (A8713_23815) nrdR 5511899..5512453 (+) 555 WP_064535621.1 transcriptional regulator NrdR -
  A8713_RS23835 (A8713_23820) - 5512618..5515506 (+) 2889 WP_064535622.1 vitamin B12-dependent ribonucleotide reductase -
  A8713_RS23840 (A8713_23825) - 5515619..5516149 (-) 531 WP_064535623.1 TerD family protein -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28090.87 Da        Isoelectric Point: 7.0668

>NTDB_id=155309 A8713_RS23825 WP_018564690.1 5510529..5511308(-) (dinR/lexA) [Streptomyces sp. SAT1]
MTTTADSATITAQDRSQGRLEPVHAMNEAANPEAHKRSLPGRPPGIRADSSGLTERQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAATLQPTDTVGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQQVAENGDIVAAMIDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=155309 A8713_RS23825 WP_018564690.1 5510529..5511308(-) (dinR/lexA) [Streptomyces sp. SAT1]
GTGACCACCACCGCAGACAGTGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCGATGAA
CGAAGCCGCGAATCCCGAGGCACACAAGCGCTCTCTGCCCGGCCGACCTCCAGGCATCAGGGCGGACAGTTCGGGACTCA
CCGAGCGGCAGCGCCGGGTGATCGAAGTCATCAGGGACTCCGTGCAGCGGCGCGGCTACCCGCCGTCCATGCGGGAGATC
GGCCAGGCCGTGGGGCTGTCCAGCACCTCCTCGGTGGCGCATCAGCTGATGGCCCTGGAGCGCAAGGGCTTCCTGCGGCG
CGACCCGCACCGCCCGCGCGCGTACGAGGTCCGCGGATCCGACCAGGCGGCCACGCTGCAGCCCACGGACACCGTGGGCA
AGCCGGCCGCGTCGTACGTCCCGCTCGTCGGGCGGATCGCGGCCGGTGGCCCGATCCTCGCCGAGGAGTCCGTCGAGGAC
GTCTTCCCGCTGCCCCGGCAGCTGGTCGGCGACGGTGAGCTGTTCGTCCTCAAGGTCGTCGGCGACTCGATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTGACGGTCCGCCGCCAGCAGGTCGCCGAGAACGGCGACATCGTGGCCGCCATGATCG
ACGGGGAGGCCACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACGCCGCGTACGAGCCG
ATCCCCGGTGACGACGCGACCATCCTCGGCAAGGTGGTCGCGGTGCTGCGGCGCGTCTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(51-114)

Peptidase S24-like (Peptidase_S24)

(141-253)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.445

81.467

0.378