Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A8713_RS17540 | Genome accession | NZ_CP015849 |
| Coordinates | 4067610..4070135 (+) | Length | 841 a.a. |
| NCBI ID | WP_018568855.1 | Uniprot ID | A0ABV8THL7 |
| Organism | Streptomyces sp. SAT1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4062610..4075135
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8713_RS17510 (A8713_17500) | - | 4063677..4064453 (+) | 777 | WP_216826772.1 | hypothetical protein | - |
| A8713_RS17515 (A8713_17505) | - | 4064508..4064699 (+) | 192 | WP_064534425.1 | hypothetical protein | - |
| A8713_RS17520 (A8713_17510) | - | 4064845..4065357 (+) | 513 | WP_079159023.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| A8713_RS17525 (A8713_17515) | - | 4065367..4065936 (+) | 570 | WP_078509999.1 | amino-acid N-acetyltransferase | - |
| A8713_RS17530 (A8713_17520) | - | 4066199..4066537 (+) | 339 | WP_018568857.1 | Lsr2 family protein | - |
| A8713_RS17535 (A8713_17525) | - | 4066554..4067168 (-) | 615 | WP_064534426.1 | SCO3374 family protein | - |
| A8713_RS17540 (A8713_17530) | clpC | 4067610..4070135 (+) | 2526 | WP_018568855.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| A8713_RS17545 (A8713_17535) | - | 4070207..4073257 (-) | 3051 | WP_064534427.1 | NACHT domain-containing protein | - |
| A8713_RS17550 (A8713_17540) | - | 4073314..4074003 (-) | 690 | WP_064534428.1 | HAD family acid phosphatase | - |
| A8713_RS17555 (A8713_17545) | - | 4074458..4075036 (+) | 579 | WP_018568852.1 | M23 family metallopeptidase | - |
Sequence
Protein
Download Length: 841 a.a. Molecular weight: 92988.12 Da Isoelectric Point: 5.8414
>NTDB_id=155285 A8713_RS17540 WP_018568855.1 4067610..4070135(+) (clpC) [Streptomyces sp. SAT1]
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAATGDTKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QDDILRIVDLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVVD
TEGEGDEKTFTFRGEEKSALPDAPPIEQAAGGAGPNLSKDA
MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF
TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETATAGGPAEGT
PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD
KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT
LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID
EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI
AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQVDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK
ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED
GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAATGDTKTNYERMKNKVSDELKQHFRPEFLNRVDDVVVFPQLT
QDDILRIVDLMIGKVDERLKDRDMGIELSQSAKELLSKKGYDPVLGARPLRRTIQREVEDTLSEKILFGELRPGHIVVVD
TEGEGDEKTFTFRGEEKSALPDAPPIEQAAGGAGPNLSKDA
Nucleotide
Download Length: 2526 bp
>NTDB_id=155285 A8713_RS17540 WP_018568855.1 4067610..4070135(+) (clpC) [Streptomyces sp. SAT1]
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCCTCGGGCCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTCCAGCTGGGGCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTGATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGCCCTGCCGAGGGCACC
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCCCGCGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCCTCGATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTCCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACCATCGAGATCCTCAAGGGCCTGCGCGACCGGTACGAGGCGCACCACCGCGTCTCGATCACCGACGAGG
CCCTGGTGCAGGCCGCCACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCGGGCGT
CCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCCACGGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTGCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCCAAGGCGATCCGCCGTACGCGCGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCGCGTCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAGGAGGGCGGCCAGCTGACGGAGAAGGTGCGCCGCAAGC
CGTTCTCGGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCACGGGTGACACGAAGACCAACTACGAGCGCATGAAGAACAAGG
TCTCGGACGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTCACC
CAGGACGACATCCTGCGGATCGTCGACCTGATGATCGGCAAGGTGGACGAGCGCCTCAAGGACCGGGACATGGGCATCGA
GCTGTCCCAGTCCGCCAAGGAGCTGCTGTCCAAGAAGGGCTACGACCCGGTCTTGGGCGCCCGGCCGCTGCGCCGGACGA
TCCAGCGGGAGGTCGAGGACACGCTCTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGCGACGAGAAGACCTTCACCTTCCGGGGTGAGGAGAAGTCGGCGCTGCCCGACGCCCCGCCGATCGA
GCAGGCGGCCGGCGGAGCCGGGCCGAACCTGAGCAAGGACGCGTGA
ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA
CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCCAAGGCCCTTGAGAGCCTCGGGA
TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCGCCCTCGGGCCACATCCCCTTC
ACCCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTCCAGCTGGGGCACAACTACATCGGCACGGAGCA
CATCCTGCTCGGCCTGATCCGCGAGGGCGAGGGCGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCCGACCTCAACCGGG
TGCGGCAGCAGGTGATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCACCGCCGGCGGCCCTGCCGAGGGCACC
CCCTCGACGTCCCTGGTCCTCGACCAGTTCGGCCGGAACCTCACCCAGGCCGCCCGCGAGTCCAAGCTCGACCCGGTCAT
CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTGATCGGTGAGC
CCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCCCAGGCCATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC
AAGCACCTCTACACCCTGGACCTCGGCGCGCTGGTCGCCGGCTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA
GGTGCTCAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTGGTCGGTGCGGGTGCCG
CCGAGGGCGCCATCGACGCCGCCTCGATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTCCAGACCATCGGCGCCACCACG
CTGGACGAGTACCGCAAGCACCTGGAGAAGGACGCGGCCCTGGAGCGCCGCTTCCAGCCCATCCAGGTCGCGGAGCCGTC
CCTGCCGCACACCATCGAGATCCTCAAGGGCCTGCGCGACCGGTACGAGGCGCACCACCGCGTCTCGATCACCGACGAGG
CCCTGGTGCAGGCCGCCACGCTGGCCGACCGGTACATCTCGGACCGCTTCCTGCCGGACAAGGCGATCGACCTGATCGAC
GAGGCCGGTTCCCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCGGGCGT
CCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCCGCCTCCCTGCGCGACAAGGAGAAGCAGCTCC
TGGCCGCCAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC
GCCGAGGTCCTCGCCACGGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGTCTGCTGCGCATGGA
GGACGAGCTGCACAAGCGGGTCATCGGCCAGGTCGACGCCGTCAAGGCGCTGTCCAAGGCGATCCGCCGTACGCGCGCCG
GTCTGAAGGACCCGAAGCGTCCCGGTGGCTCGTTCATCTTCGCCGGTCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG
GCGCTCGCCGAGTTCCTCTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT
CTCGCGTCTCTTCGGTTCGCCCCCCGGCTACGTGGGCTACGAGGAGGGCGGCCAGCTGACGGAGAAGGTGCGCCGCAAGC
CGTTCTCGGTCGTCCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTGCAGATCCTGGAGGAC
GGTCGCCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG
GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCGGCCACGGGTGACACGAAGACCAACTACGAGCGCATGAAGAACAAGG
TCTCGGACGAGCTGAAGCAGCACTTCCGGCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTCACC
CAGGACGACATCCTGCGGATCGTCGACCTGATGATCGGCAAGGTGGACGAGCGCCTCAAGGACCGGGACATGGGCATCGA
GCTGTCCCAGTCCGCCAAGGAGCTGCTGTCCAAGAAGGGCTACGACCCGGTCTTGGGCGCCCGGCCGCTGCGCCGGACGA
TCCAGCGGGAGGTCGAGGACACGCTCTCGGAGAAGATCCTCTTCGGCGAGCTGCGCCCCGGTCACATCGTGGTCGTGGAC
ACCGAGGGCGAGGGCGACGAGAAGACCTTCACCTTCCGGGGTGAGGAGAAGTCGGCGCTGCCCGACGCCCCGCCGATCGA
GCAGGCGGCCGGCGGAGCCGGGCCGAACCTGAGCAAGGACGCGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
61.596 |
95.363 |
0.587 |
| clpC | Streptococcus mutans UA159 |
44.337 |
98.692 |
0.438 |
| clpC | Streptococcus thermophilus LMD-9 |
43.027 |
99.762 |
0.429 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.857 |
99.881 |
0.428 |
| clpC | Streptococcus pneumoniae Rx1 |
44.458 |
95.482 |
0.424 |
| clpC | Streptococcus pneumoniae D39 |
44.458 |
95.482 |
0.424 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.951 |
96.314 |
0.423 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.486 |
94.887 |
0.422 |
| clpE | Streptococcus mutans UA159 |
54.153 |
74.435 |
0.403 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
51.302 |
77.646 |
0.398 |
| clpE | Streptococcus pneumoniae R6 |
52.201 |
75.624 |
0.395 |
| clpE | Streptococcus pneumoniae D39 |
52.201 |
75.624 |
0.395 |
| clpE | Streptococcus pneumoniae Rx1 |
52.201 |
75.624 |
0.395 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.97 |
74.078 |
0.392 |