Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   A8713_RS09560 Genome accession   NZ_CP015849
Coordinates   2190403..2192136 (+) Length   577 a.a.
NCBI ID   WP_064533033.1    Uniprot ID   -
Organism   Streptomyces sp. SAT1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2185403..2197136
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A8713_RS33780 - 2185667..2185831 (+) 165 WP_173860782.1 hypothetical protein -
  A8713_RS09530 (A8713_09520) - 2185863..2187605 (-) 1743 WP_064533031.1 DUF4328 domain-containing protein -
  A8713_RS09550 (A8713_09540) - 2188412..2188714 (+) 303 WP_018570679.1 hypothetical protein -
  A8713_RS09555 (A8713_09545) - 2188776..2190230 (+) 1455 WP_064533032.1 FGGY family carbohydrate kinase -
  A8713_RS09560 (A8713_09550) rcrP 2190403..2192136 (+) 1734 WP_064533033.1 ABC transporter ATP-binding protein Regulator
  A8713_RS09565 (A8713_09555) rcrQ 2192136..2194064 (+) 1929 WP_064533034.1 ABC transporter ATP-binding protein Regulator
  A8713_RS09570 (A8713_09560) - 2194121..2195374 (-) 1254 WP_064533035.1 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62698.93 Da        Isoelectric Point: 6.7595

>NTDB_id=155264 A8713_RS09560 WP_064533033.1 2190403..2192136(+) (rcrP) [Streptomyces sp. SAT1]
MLIRLLRTYLRPYRKPIALLVLLQFLQTCATLYLPTLNAHIIDKGVVKGDTDYILTFGAVMIAISLAQVGCNIGAVYYGA
RTASSLGRDVRAAVFDRVQSFSAREVGQFGAPSLITRTTNDVQQVQMLALMTFTLMVSAPIMCVGGVVLALGLDVPLSGV
LVAVVPVLGISVTLIVRRLRPLFRSMQTRLDTVNRVLREQISGNRVIRAFVRDTYENDRFRAANGELTEMSLATGRMLSL
MFPIVMTVVNLSSIAVVWFGAHRIDSGGMMIGDLTAFLAYLMQIVMSVMMATFMFMMVPRAEVCAERIQEVMDTESSVVP
PLAPVRELRSHGHLELRGAGFRYPGAEEPVLKAVDLTARPGEVTAVIGSTGSGKSTLLGLVARLFDATDGEVLVDGADVR
TLDAKLLARTVGMVPQKPYLFAGTVATNLRYGNPDATDEELWQALEVAQAKDFVSRLEGGLDAPISQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALTRETAEATVVIVAQRVATIRDADRIIVLDEGRVVGTGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=155264 A8713_RS09560 WP_064533033.1 2190403..2192136(+) (rcrP) [Streptomyces sp. SAT1]
GTGCTCATACGACTTCTGCGGACCTATCTCAGGCCCTACAGGAAACCCATCGCTCTTCTGGTGCTGCTTCAGTTCCTCCA
GACCTGCGCCACCCTCTACCTGCCCACGCTGAACGCCCACATCATCGACAAGGGCGTGGTGAAAGGTGACACGGATTACA
TCCTGACGTTCGGCGCCGTGATGATCGCCATCTCGCTGGCGCAGGTGGGATGCAACATCGGTGCCGTGTACTACGGCGCC
AGGACCGCCTCCTCGCTCGGCCGGGACGTGCGGGCCGCCGTCTTCGACCGGGTGCAGTCCTTCTCGGCGCGCGAGGTCGG
CCAGTTCGGCGCGCCCTCGCTCATCACGCGTACGACCAATGACGTCCAGCAGGTACAGATGCTGGCCCTGATGACGTTCA
CCCTGATGGTGTCGGCGCCCATCATGTGCGTGGGTGGTGTCGTGCTGGCCCTCGGCCTGGACGTGCCGCTGTCGGGCGTC
CTGGTCGCCGTCGTACCGGTGCTGGGCATCTCCGTGACGCTGATCGTGCGCCGGCTGCGCCCGCTGTTCCGGTCCATGCA
GACCCGCCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCAGCGGCAACCGCGTCATCCGCGCCTTCGTCCGCGACA
CCTACGAGAACGACCGCTTCCGCGCGGCCAACGGCGAGCTGACCGAGATGTCCCTGGCCACCGGCCGGATGCTCTCGCTG
ATGTTCCCGATCGTGATGACGGTGGTCAATCTGTCGTCCATCGCGGTGGTGTGGTTCGGCGCCCACCGCATCGACAGCGG
CGGCATGATGATCGGCGACCTCACCGCGTTCCTCGCCTATCTGATGCAGATCGTGATGTCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCGGAGGTCTGCGCCGAGCGCATCCAGGAGGTCATGGACACCGAGTCCAGCGTCGTCCCG
CCCCTGGCGCCGGTGCGCGAGCTGCGCAGCCACGGCCATCTGGAGCTGCGCGGGGCGGGCTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGAAGGCCGTGGACCTGACCGCCCGGCCCGGCGAGGTGACCGCCGTGATCGGCTCGACCGGCAGCGGCA
AGTCCACCCTGCTGGGCCTGGTGGCGCGGCTGTTCGACGCGACCGACGGCGAGGTCCTGGTCGACGGCGCCGACGTGCGC
ACCCTGGACGCCAAGCTGCTGGCGCGGACCGTCGGCATGGTGCCGCAGAAGCCGTACCTGTTCGCGGGCACGGTCGCCAC
CAACCTTCGCTACGGCAATCCGGACGCCACCGACGAGGAGCTGTGGCAGGCGCTGGAGGTGGCGCAGGCCAAGGACTTCG
TCAGCAGGCTGGAGGGCGGTCTGGACGCGCCGATCTCGCAGGGCGGCACCAATGTGTCCGGCGGCCAGCGCCAGCGCCTG
GCCATCGCCCGCACCCTGGTGCAGCGCCCGGAGATCTACCTCTTCGACGACTCCTTCTCCGCCCTCGACTACGCCACCGA
CGCGGCCCTGCGCGCCGCGCTCACCCGGGAGACGGCCGAGGCGACCGTCGTCATCGTCGCCCAGCGGGTGGCGACCATCC
GGGACGCCGACCGGATCATCGTCCTGGACGAGGGACGGGTCGTCGGCACCGGCCGCCATCACGAACTGATGGCGGGCAAC
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(351-498)

ABC transporter transmembrane region (ABC_membrane)

(18-288)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

37.716

100

0.378