Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A8713_RS03485 | Genome accession | NZ_CP015849 |
| Coordinates | 819230..821830 (-) | Length | 866 a.a. |
| NCBI ID | WP_064531358.1 | Uniprot ID | - |
| Organism | Streptomyces sp. SAT1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 814230..826830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A8713_RS03460 (A8713_03450) | - | 814729..815508 (+) | 780 | WP_018570954.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| A8713_RS03465 (A8713_03455) | - | 815660..816040 (-) | 381 | WP_018570955.1 | luciferase family protein | - |
| A8713_RS03470 (A8713_03460) | - | 816247..817107 (+) | 861 | WP_064531355.1 | class I SAM-dependent methyltransferase | - |
| A8713_RS03475 (A8713_03465) | - | 817277..817849 (+) | 573 | WP_237305298.1 | hypothetical protein | - |
| A8713_RS03480 (A8713_03470) | - | 818053..819222 (+) | 1170 | WP_064531357.1 | MFS transporter | - |
| A8713_RS03485 (A8713_03475) | clpC | 819230..821830 (-) | 2601 | WP_064531358.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| A8713_RS03490 (A8713_03480) | - | 822051..822812 (+) | 762 | WP_064531359.1 | maleylpyruvate isomerase family mycothiol-dependent enzyme | - |
| A8713_RS03495 (A8713_03485) | - | 822852..823517 (-) | 666 | WP_064531360.1 | response regulator transcription factor | - |
| A8713_RS03500 (A8713_03490) | - | 823514..824746 (-) | 1233 | WP_107440767.1 | sensor histidine kinase | - |
| A8713_RS03505 (A8713_03495) | - | 824851..826149 (-) | 1299 | WP_064531362.1 | geranylgeranyl reductase family protein | - |
Sequence
Protein
Download Length: 866 a.a. Molecular weight: 93530.08 Da Isoelectric Point: 4.6744
>NTDB_id=155252 A8713_RS03485 WP_064531358.1 819230..821830(-) (clpC) [Streptomyces sp. SAT1]
MTMSPFGASFGGPDPFSEILNRFFGMTPGASPPQVQRVPIGRLLTESAQDLINRATGKAAEDGSSDLDTEHLLWACTQVE
PARGLLAQAGADPDRLAADLARALPAESGTPSAEPGLTPAAKRVLLRAYEHSRAAGVSYIGPEHILGALLDTPGAAPTKI
LGAHGIDTEQLRRGAESVARSEAGPGGAEPPSDTPTLDQYGRDLTEEARAGKLDPVVGRAEEIEQTVEILSRRSKNNPVL
IGEPGVGKTAIVEGLAQRIIAGDVPKTLENKRVVALDLTGLVAGAQYRGQFEERLKNVIDEVKAASESTILFLDELHTVV
GAGATGEGSMDAGNILKPALARGELHVVGATTLTEYRKYVEKDAALERRFQPVMVPEPSVEETVQILEGLRDSYEAHHQV
RYTDDALAAAAELSDRYVTDRFLPDKAIDLLDQAGARVRLRSMGRSTEVAEREDRLAKLRREKDQAVAGEDFERASELKD
RITDVETELEGLAERREGVLEVTVADIADVLSRRTGIPVAQLTESEKERLLKLEDALHSRVVGQDEAVTAVAQAVRRSRA
GMGDPNRPVGSFLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQ
PYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNIGAQRILAHHGDVAAIKDQLMEDLRGRFLP
EFLNRIDDIIIFHGLGEAELNQIVDLLLDNSRRRVRAQGMELEVTDAAKKLLVAHGHQPEFGARPLRRTLQAELDNRIAS
LLLSDSADPGDTIVADVENDALVCRVERPAPSDAKVYENAENAENAEAAGDGAKAQGEAGGPEAAS
MTMSPFGASFGGPDPFSEILNRFFGMTPGASPPQVQRVPIGRLLTESAQDLINRATGKAAEDGSSDLDTEHLLWACTQVE
PARGLLAQAGADPDRLAADLARALPAESGTPSAEPGLTPAAKRVLLRAYEHSRAAGVSYIGPEHILGALLDTPGAAPTKI
LGAHGIDTEQLRRGAESVARSEAGPGGAEPPSDTPTLDQYGRDLTEEARAGKLDPVVGRAEEIEQTVEILSRRSKNNPVL
IGEPGVGKTAIVEGLAQRIIAGDVPKTLENKRVVALDLTGLVAGAQYRGQFEERLKNVIDEVKAASESTILFLDELHTVV
GAGATGEGSMDAGNILKPALARGELHVVGATTLTEYRKYVEKDAALERRFQPVMVPEPSVEETVQILEGLRDSYEAHHQV
RYTDDALAAAAELSDRYVTDRFLPDKAIDLLDQAGARVRLRSMGRSTEVAEREDRLAKLRREKDQAVAGEDFERASELKD
RITDVETELEGLAERREGVLEVTVADIADVLSRRTGIPVAQLTESEKERLLKLEDALHSRVVGQDEAVTAVAQAVRRSRA
GMGDPNRPVGSFLFLGPTGVGKTELAKALAELLFGDENRMVRFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQ
PYSVLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRNTVVIMTSNIGAQRILAHHGDVAAIKDQLMEDLRGRFLP
EFLNRIDDIIIFHGLGEAELNQIVDLLLDNSRRRVRAQGMELEVTDAAKKLLVAHGHQPEFGARPLRRTLQAELDNRIAS
LLLSDSADPGDTIVADVENDALVCRVERPAPSDAKVYENAENAENAEAAGDGAKAQGEAGGPEAAS
Nucleotide
Download Length: 2601 bp
>NTDB_id=155252 A8713_RS03485 WP_064531358.1 819230..821830(-) (clpC) [Streptomyces sp. SAT1]
ATGACGATGTCCCCCTTCGGCGCCTCGTTCGGCGGCCCGGACCCGTTCTCCGAGATCCTCAACCGCTTCTTCGGCATGAC
ACCGGGCGCCTCGCCGCCCCAGGTGCAGCGGGTGCCGATCGGACGGCTGCTCACCGAGTCCGCCCAGGACCTGATCAACC
GCGCCACCGGCAAGGCGGCCGAGGACGGCAGTTCCGACCTGGACACCGAGCACCTGCTGTGGGCCTGCACCCAGGTGGAG
CCCGCCCGCGGCCTGCTCGCCCAGGCGGGCGCCGACCCCGACCGGCTCGCCGCCGACCTCGCGCGGGCACTGCCCGCCGA
GAGCGGCACCCCCTCGGCCGAGCCGGGCCTGACCCCGGCCGCCAAGCGGGTGCTGCTGCGCGCCTACGAGCACTCCCGGG
CGGCCGGTGTCTCCTACATCGGCCCGGAACACATCCTCGGCGCCCTGCTGGACACCCCGGGCGCGGCACCGACCAAGATC
CTGGGCGCCCACGGCATCGACACCGAGCAACTGCGCCGCGGCGCGGAGAGCGTCGCCCGCTCCGAGGCCGGGCCCGGCGG
CGCCGAGCCGCCGAGCGACACGCCGACCCTCGACCAGTACGGCCGCGACCTGACCGAGGAGGCCCGCGCCGGAAAGCTGG
ACCCGGTGGTGGGCCGGGCTGAGGAGATCGAGCAGACCGTGGAGATCCTCTCCCGCCGCTCGAAGAACAACCCTGTGCTG
ATCGGCGAACCGGGCGTCGGCAAGACCGCGATCGTGGAGGGCCTGGCCCAGCGGATCATCGCCGGGGACGTGCCCAAGAC
CCTGGAGAACAAGCGGGTCGTCGCCCTCGACCTGACGGGACTCGTCGCCGGCGCCCAGTACCGTGGCCAGTTCGAGGAGC
GGCTGAAGAACGTCATCGACGAGGTCAAGGCGGCCTCCGAGTCGACGATCCTGTTCCTGGACGAACTGCACACCGTGGTC
GGCGCGGGCGCCACCGGCGAGGGCTCGATGGACGCCGGGAACATCCTCAAACCCGCCCTCGCCCGTGGTGAACTGCACGT
CGTCGGCGCCACCACCCTCACCGAGTACCGCAAGTACGTGGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCGGTCA
TGGTGCCCGAGCCCAGCGTCGAGGAGACCGTGCAGATCCTGGAGGGCCTGCGCGACTCCTACGAGGCCCACCACCAGGTC
CGCTACACCGACGACGCGCTGGCCGCCGCCGCCGAGCTGTCCGACCGGTACGTCACCGACCGGTTCCTGCCCGACAAGGC
CATCGACCTGCTCGACCAGGCCGGCGCGCGGGTGCGGCTGCGCTCGATGGGCCGGTCCACCGAGGTCGCCGAGCGCGAGG
ACCGGCTGGCCAAGCTGCGCCGCGAGAAGGACCAGGCCGTGGCCGGGGAGGACTTCGAGCGCGCCTCCGAGCTGAAGGAC
CGCATCACCGACGTGGAGACCGAGCTGGAAGGGCTCGCCGAGCGGCGCGAGGGCGTGCTGGAGGTGACCGTCGCCGACAT
CGCCGACGTACTGTCCCGGCGCACCGGCATCCCCGTCGCCCAGCTCACCGAGAGCGAGAAGGAAAGGCTGCTGAAGCTGG
AGGACGCCCTGCACTCGCGCGTCGTCGGGCAGGACGAGGCGGTCACCGCGGTCGCCCAGGCGGTGCGCCGCAGCCGGGCC
GGCATGGGCGATCCCAACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGACCGACCGGCGTCGGCAAGACCGAACTGGCCAA
GGCGCTCGCCGAGCTGCTGTTCGGCGACGAGAACCGCATGGTCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACCG
TCTCCCGGCTCGTCGGGGCCCCGCCCGGCTATGTCGGCCACGAGGAGGCGGGCCAGCTCACCGAGAAGGTCCGCCGCCAG
CCCTACAGCGTGCTGCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACGTCTTCAACACCCTGCTCCAGGTGCTGGACGA
CGGACGGCTCACCGACGCGCAGGGCCGCACCGTCGACTTCCGCAACACCGTGGTCATCATGACCTCGAACATCGGCGCCC
AGCGGATCCTCGCCCACCACGGCGACGTCGCCGCCATCAAGGACCAGCTGATGGAGGACCTGCGCGGCAGGTTCCTGCCC
GAGTTCCTCAACCGCATCGACGACATCATCATCTTCCACGGCCTGGGCGAGGCGGAGCTGAACCAGATCGTCGATCTGCT
GCTGGACAACAGCCGCCGTCGCGTCCGCGCCCAGGGCATGGAACTGGAGGTCACCGACGCGGCGAAGAAGCTGCTGGTCG
CCCACGGCCACCAGCCCGAGTTCGGCGCCCGCCCGCTGCGCCGCACCCTCCAGGCCGAGCTGGACAACCGCATCGCCTCC
CTGCTGCTGAGCGACTCGGCCGACCCCGGTGACACGATCGTCGCCGACGTCGAGAACGACGCCCTGGTGTGCCGGGTCGA
GCGTCCGGCGCCGTCCGACGCCAAGGTCTACGAGAACGCCGAGAACGCCGAGAACGCCGAGGCCGCGGGGGACGGGGCGA
AGGCGCAGGGGGAGGCGGGGGGCCCGGAAGCGGCCTCCTGA
ATGACGATGTCCCCCTTCGGCGCCTCGTTCGGCGGCCCGGACCCGTTCTCCGAGATCCTCAACCGCTTCTTCGGCATGAC
ACCGGGCGCCTCGCCGCCCCAGGTGCAGCGGGTGCCGATCGGACGGCTGCTCACCGAGTCCGCCCAGGACCTGATCAACC
GCGCCACCGGCAAGGCGGCCGAGGACGGCAGTTCCGACCTGGACACCGAGCACCTGCTGTGGGCCTGCACCCAGGTGGAG
CCCGCCCGCGGCCTGCTCGCCCAGGCGGGCGCCGACCCCGACCGGCTCGCCGCCGACCTCGCGCGGGCACTGCCCGCCGA
GAGCGGCACCCCCTCGGCCGAGCCGGGCCTGACCCCGGCCGCCAAGCGGGTGCTGCTGCGCGCCTACGAGCACTCCCGGG
CGGCCGGTGTCTCCTACATCGGCCCGGAACACATCCTCGGCGCCCTGCTGGACACCCCGGGCGCGGCACCGACCAAGATC
CTGGGCGCCCACGGCATCGACACCGAGCAACTGCGCCGCGGCGCGGAGAGCGTCGCCCGCTCCGAGGCCGGGCCCGGCGG
CGCCGAGCCGCCGAGCGACACGCCGACCCTCGACCAGTACGGCCGCGACCTGACCGAGGAGGCCCGCGCCGGAAAGCTGG
ACCCGGTGGTGGGCCGGGCTGAGGAGATCGAGCAGACCGTGGAGATCCTCTCCCGCCGCTCGAAGAACAACCCTGTGCTG
ATCGGCGAACCGGGCGTCGGCAAGACCGCGATCGTGGAGGGCCTGGCCCAGCGGATCATCGCCGGGGACGTGCCCAAGAC
CCTGGAGAACAAGCGGGTCGTCGCCCTCGACCTGACGGGACTCGTCGCCGGCGCCCAGTACCGTGGCCAGTTCGAGGAGC
GGCTGAAGAACGTCATCGACGAGGTCAAGGCGGCCTCCGAGTCGACGATCCTGTTCCTGGACGAACTGCACACCGTGGTC
GGCGCGGGCGCCACCGGCGAGGGCTCGATGGACGCCGGGAACATCCTCAAACCCGCCCTCGCCCGTGGTGAACTGCACGT
CGTCGGCGCCACCACCCTCACCGAGTACCGCAAGTACGTGGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCGGTCA
TGGTGCCCGAGCCCAGCGTCGAGGAGACCGTGCAGATCCTGGAGGGCCTGCGCGACTCCTACGAGGCCCACCACCAGGTC
CGCTACACCGACGACGCGCTGGCCGCCGCCGCCGAGCTGTCCGACCGGTACGTCACCGACCGGTTCCTGCCCGACAAGGC
CATCGACCTGCTCGACCAGGCCGGCGCGCGGGTGCGGCTGCGCTCGATGGGCCGGTCCACCGAGGTCGCCGAGCGCGAGG
ACCGGCTGGCCAAGCTGCGCCGCGAGAAGGACCAGGCCGTGGCCGGGGAGGACTTCGAGCGCGCCTCCGAGCTGAAGGAC
CGCATCACCGACGTGGAGACCGAGCTGGAAGGGCTCGCCGAGCGGCGCGAGGGCGTGCTGGAGGTGACCGTCGCCGACAT
CGCCGACGTACTGTCCCGGCGCACCGGCATCCCCGTCGCCCAGCTCACCGAGAGCGAGAAGGAAAGGCTGCTGAAGCTGG
AGGACGCCCTGCACTCGCGCGTCGTCGGGCAGGACGAGGCGGTCACCGCGGTCGCCCAGGCGGTGCGCCGCAGCCGGGCC
GGCATGGGCGATCCCAACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGACCGACCGGCGTCGGCAAGACCGAACTGGCCAA
GGCGCTCGCCGAGCTGCTGTTCGGCGACGAGAACCGCATGGTCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACCG
TCTCCCGGCTCGTCGGGGCCCCGCCCGGCTATGTCGGCCACGAGGAGGCGGGCCAGCTCACCGAGAAGGTCCGCCGCCAG
CCCTACAGCGTGCTGCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACGTCTTCAACACCCTGCTCCAGGTGCTGGACGA
CGGACGGCTCACCGACGCGCAGGGCCGCACCGTCGACTTCCGCAACACCGTGGTCATCATGACCTCGAACATCGGCGCCC
AGCGGATCCTCGCCCACCACGGCGACGTCGCCGCCATCAAGGACCAGCTGATGGAGGACCTGCGCGGCAGGTTCCTGCCC
GAGTTCCTCAACCGCATCGACGACATCATCATCTTCCACGGCCTGGGCGAGGCGGAGCTGAACCAGATCGTCGATCTGCT
GCTGGACAACAGCCGCCGTCGCGTCCGCGCCCAGGGCATGGAACTGGAGGTCACCGACGCGGCGAAGAAGCTGCTGGTCG
CCCACGGCCACCAGCCCGAGTTCGGCGCCCGCCCGCTGCGCCGCACCCTCCAGGCCGAGCTGGACAACCGCATCGCCTCC
CTGCTGCTGAGCGACTCGGCCGACCCCGGTGACACGATCGTCGCCGACGTCGAGAACGACGCCCTGGTGTGCCGGGTCGA
GCGTCCGGCGCCGTCCGACGCCAAGGTCTACGAGAACGCCGAGAACGCCGAGAACGCCGAGGCCGCGGGGGACGGGGCGA
AGGCGCAGGGGGAGGCGGGGGGCCCGGAAGCGGCCTCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
51.301 |
93.187 |
0.478 |
| clpC | Streptococcus thermophilus LMD-9 |
42.976 |
96.998 |
0.417 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.011 |
96.651 |
0.416 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.791 |
90.531 |
0.415 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.067 |
94.111 |
0.405 |
| clpC | Streptococcus mutans UA159 |
42.683 |
94.688 |
0.404 |
| clpC | Streptococcus pneumoniae D39 |
43.354 |
92.956 |
0.403 |
| clpC | Streptococcus pneumoniae Rx1 |
43.354 |
92.956 |
0.403 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.014 |
74.711 |
0.396 |
| clpE | Streptococcus mutans UA159 |
54.754 |
70.439 |
0.386 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.464 |
72.633 |
0.381 |
| clpE | Streptococcus pneumoniae D39 |
52.464 |
72.633 |
0.381 |
| clpE | Streptococcus pneumoniae R6 |
52.464 |
72.633 |
0.381 |
| clpE | Streptococcus pneumoniae Rx1 |
52.464 |
72.633 |
0.381 |