Detailed information NTG0155036

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CMUC_RS01285
• Genome accession: NZ_CP012542
• Coordinates: 245606..246529 (+)
• Length: 307 a.a.
• NCBI ID: WP_171993332.1
• Uniprot ID: -
• Organism: Campylobacter mucosalis CCUG 21559
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 240606..251529

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CMUC_RS01260 (CMUC_0246)	-	241513..242844 (-)	1332	WP_169752519.1	sensor histidine kinase	-
CMUC_RS01265 (CMUC_0247)	-	242828..243487 (-)	660	WP_169752518.1	response regulator transcription factor	-
CMUC_RS01270 (CMUC_0248)	-	243527..244003 (-)	477	WP_169752517.1	hypothetical protein	-
CMUC_RS01275 (CMUC_0249)	-	244000..244479 (-)	480	WP_171993330.1	PepSY domain-containing protein	-
CMUC_RS01280 (CMUC_0250)	-	244593..245609 (+)	1017	WP_171993331.1	glycosyltransferase family 4 protein	-
CMUC_RS01285 (CMUC_0251)	waaF	245606..246529 (+)	924	WP_171993332.1	lipopolysaccharide heptosyltransferase II	Regulator
CMUC_RS01290 (CMUC_0252)	modB	246526..247185 (-)	660	WP_171993333.1	molybdate ABC transporter permease subunit	-
CMUC_RS01295 (CMUC_0253)	-	247182..248051 (-)	870	WP_171993334.1	ABC transporter ATP-binding protein	-
CMUC_RS01300 (CMUC_0254)	-	248038..248433 (-)	396	WP_171993335.1	TOBE domain-containing protein	-
CMUC_RS01305 (CMUC_0255)	modA	248433..249173 (-)	741	WP_171993336.1	molybdate ABC transporter substrate-binding protein	-
CMUC_RS01310 (CMUC_0256)	-	249175..249960 (-)	786	WP_169752509.1	TOBE domain-containing protein	-
CMUC_RS01315 (CMUC_0257)	-	250106..250792 (+)	687	WP_034969086.1	VacJ family lipoprotein	-
CMUC_RS01320 (CMUC_0258)	-	250794..251384 (+)	591	WP_171993337.1	ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34778.17 Da
• Isoelectric Point: 9.7997

>NTDB_id=155036 CMUC_RS01285 WP_171993332.1 245606..246529(+) (waaF) [Campylobacter mucosalis CCUG 21559]
MRIFIELPTWLGDCVMATPAIESIAQKHKNAKFVFFGSFVSTQLLKTHKNCEFVVVDESKKAKFRLFYLYKMAKNLGKFD
LAISFRSSLISSFLLKMLSKNSFKFKKMQEQKHQVLKYLDFIKSALKIDEMCDNLKLNFTPKPLKNAIGLNPGATYGSAK
RWYPEYFANVAMLLGEREIFIFGGQNESEICAKIAEILSQNGVKFTNLCGQTSIKELCEYIGGLGLFITNDSGPMHIAAA
FKVPTIALFGPTKWAETSPWGNPNARILRLNLDCMPCMKRVCPIKTHECMKNLTPKMVLDEIKKCGF

Nucleotide

• Length: 924 bp

>NTDB_id=155036 CMUC_RS01285 WP_171993332.1 245606..246529(+) (waaF) [Campylobacter mucosalis CCUG 21559]
ATGAGAATTTTTATAGAGCTACCCACTTGGCTTGGAGATTGCGTTATGGCAACCCCAGCGATTGAGAGTATCGCACAAAA
ACATAAAAACGCTAAGTTTGTTTTTTTTGGCTCGTTTGTAAGCACACAGCTTCTTAAAACGCACAAAAACTGCGAATTTG
TCGTCGTTGATGAGAGCAAAAAGGCAAAATTTCGCTTGTTTTATCTATATAAAATGGCAAAAAATTTAGGAAAGTTTGAC
CTTGCCATTAGCTTTCGTAGTTCGCTAATAAGCTCGTTTTTACTAAAAATGCTAAGCAAAAATAGCTTTAAATTTAAAAA
GATGCAAGAGCAAAAACATCAGGTGTTAAAATATCTTGATTTTATAAAATCGGCTTTAAAAATTGATGAGATGTGTGATA
ATTTAAAGCTAAATTTCACACCAAAACCGCTAAAAAACGCTATTGGATTAAATCCTGGTGCAACTTACGGGTCTGCAAAG
AGATGGTATCCAGAGTATTTTGCTAATGTTGCAATGTTGCTTGGTGAGCGTGAAATTTTTATCTTTGGTGGGCAAAATGA
GAGTGAAATTTGTGCTAAAATCGCAGAAATTTTAAGCCAAAATGGGGTTAAATTTACAAACCTTTGTGGGCAAACTAGCA
TTAAAGAACTTTGCGAATATATCGGTGGTCTTGGACTTTTTATCACAAATGATAGCGGTCCTATGCACATAGCAGCCGCC
TTTAAAGTGCCTACAATCGCACTTTTTGGCCCGACAAAATGGGCTGAAACCAGCCCTTGGGGTAACCCAAACGCTAGGAT
TTTACGCCTAAATTTGGATTGTATGCCCTGTATGAAGCGTGTTTGTCCCATAAAAACGCACGAGTGTATGAAAAATCTAA
CGCCAAAAATGGTGCTTGATGAGATAAAAAAGTGCGGATTTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (144-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.302	100	0.485