Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   BBEV_RS06565 Genome accession   NZ_CP012502
Coordinates   1420768..1422471 (+) Length   567 a.a.
NCBI ID   WP_069364741.1    Uniprot ID   A0A1D7QUP0
Organism   Salisediminibacterium beveridgei strain MLTeJB     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1415768..1427471
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBEV_RS06545 (BBEV_1309) - 1416512..1417126 (+) 615 WP_069364737.1 hypothetical protein -
  BBEV_RS06550 (BBEV_1310) dxs 1417136..1419025 (+) 1890 WP_069364738.1 1-deoxy-D-xylulose-5-phosphate synthase -
  BBEV_RS06555 (BBEV_1311) - 1419026..1419829 (+) 804 WP_069364739.1 TlyA family RNA methyltransferase -
  BBEV_RS06560 (BBEV_1312) ahrC 1420299..1420748 (+) 450 WP_069364740.1 transcriptional regulator AhrC/ArgR -
  BBEV_RS06565 (BBEV_1313) recN 1420768..1422471 (+) 1704 WP_069364741.1 DNA repair protein RecN Machinery gene
  BBEV_RS06570 (BBEV_1314) spo0A 1422622..1423393 (+) 772 Protein_1312 sporulation transcription factor Spo0A -
  BBEV_RS06575 (BBEV_1315) - 1423423..1423680 (-) 258 WP_407690243.1 DUF2627 domain-containing protein -
  BBEV_RS06580 (BBEV_1316) - 1423852..1425909 (+) 2058 WP_198155076.1 sigma-54-dependent Fis family transcriptional regulator -
  BBEV_RS06585 (BBEV_1317) - 1426054..1426974 (+) 921 WP_069364742.1 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase -

Sequence

Protein


Download         Length: 567 a.a.        Molecular weight: 64132.51 Da        Isoelectric Point: 5.1460

>NTDB_id=154750 BBEV_RS06565 WP_069364741.1 1420768..1422471(+) (recN) [Salisediminibacterium beveridgei strain MLTeJB]
MLLELTIKNFAIIENVTISFEDGLTVLTGETGAGKSIIIDAIGQLIGGRGSADFVRHQSKRAEIEGVFSTSNAVDKELQH
LFTELDIPIDEDGTVLLRREITSQGKSICRINGKLTTLGILRQIGQTLVDIHGQHEHQRLLQQDQHIQFLDRFAGKSMEK
AKLEYHHVYKDYMQKKKQMKQFSENEQELAQRLDLLRYQYEEISGAELSPGEDTELIEEKKILENSEQLYSSARGAYDAL
YGDGKGLEWVMTAMHQVEDAAKVDDNLQELKESVANQYFLLEEASFSLRDYFEQISFDSERLNEIEGRLSEVQQLKRKYG
STVDEILEYASRIEEEMDTLSNREQRMEKWQEELNALHKDLMIEANHLSDLRRNAAVKLEKQISQQLKSLYMKDTVFNVV
FEKQSTTQSDGGITKEGIDRVSFQVATNKGEPLKSLAKTASGGEISRLILALKSILSKHEGVTSLIFDEVDTGVSGRVAQ
AIAEKIHGISRSSQVLCITHLPQVAAMADTHLFISKTAQKNRTVTHVNPLTEKEKTEEISRMISGVEITDLTRQHAEELI
VQASRMK

Nucleotide


Download         Length: 1704 bp        

>NTDB_id=154750 BBEV_RS06565 WP_069364741.1 1420768..1422471(+) (recN) [Salisediminibacterium beveridgei strain MLTeJB]
TTGTTATTGGAACTCACGATTAAGAATTTTGCAATTATCGAGAATGTAACGATTTCGTTTGAAGATGGCTTAACTGTATT
AACTGGTGAGACAGGTGCAGGAAAATCAATTATTATCGATGCCATTGGCCAGTTAATCGGCGGACGCGGGTCTGCTGATT
TTGTTCGTCATCAAAGCAAGCGGGCTGAAATCGAAGGTGTCTTTTCCACTAGTAATGCTGTAGATAAGGAGCTTCAGCAT
TTATTTACGGAACTTGATATTCCGATCGATGAAGACGGAACTGTACTTCTTCGCAGGGAAATTACAAGTCAGGGTAAGAG
TATCTGCAGAATTAATGGAAAGCTGACAACCTTGGGGATTTTAAGGCAAATAGGTCAAACGCTGGTTGATATCCATGGGC
AACATGAACACCAAAGACTTCTGCAACAGGATCAGCACATTCAGTTTCTCGATCGCTTTGCAGGGAAGTCGATGGAAAAA
GCAAAACTCGAGTATCATCATGTCTATAAAGACTACATGCAAAAGAAAAAACAAATGAAGCAATTCTCGGAGAATGAACA
AGAGCTCGCACAGCGACTTGATCTTTTGAGATATCAGTATGAAGAGATATCGGGAGCAGAGCTTTCGCCAGGGGAGGATA
CAGAGCTGATTGAGGAGAAAAAGATCCTCGAGAACAGTGAACAACTTTACTCCTCAGCAAGAGGAGCGTATGATGCTTTG
TATGGTGATGGAAAAGGTTTGGAATGGGTAATGACCGCGATGCATCAGGTGGAAGATGCAGCTAAGGTGGATGACAATTT
ACAAGAGTTAAAAGAAAGTGTAGCCAATCAGTATTTCTTACTAGAAGAAGCTTCCTTTTCATTACGGGATTATTTTGAAC
AGATTTCTTTTGATTCGGAGCGATTAAATGAAATTGAAGGCAGGCTATCTGAAGTCCAACAGCTAAAAAGAAAATATGGT
TCGACTGTTGATGAAATATTGGAATACGCTTCACGGATCGAAGAAGAAATGGACACACTTTCAAACCGTGAACAACGGAT
GGAAAAGTGGCAAGAAGAACTGAATGCATTGCACAAAGATCTGATGATTGAAGCGAATCACTTGTCTGATCTAAGGCGTA
ACGCAGCAGTTAAACTTGAAAAACAAATTTCCCAACAGTTAAAGTCGCTTTACATGAAAGATACGGTATTCAATGTCGTA
TTTGAAAAACAAAGTACGACTCAATCTGATGGAGGCATAACAAAAGAAGGGATTGATCGTGTATCTTTCCAGGTTGCGAC
CAATAAAGGAGAACCCCTTAAATCGTTGGCTAAAACTGCATCAGGTGGAGAGATTTCAAGATTGATCCTCGCTTTGAAAT
CGATATTATCCAAGCATGAAGGTGTTACATCCCTGATTTTTGATGAAGTTGACACGGGCGTGAGTGGACGTGTTGCCCAA
GCGATTGCAGAGAAAATACATGGCATATCAAGATCATCGCAAGTGCTCTGTATTACACACTTACCTCAAGTGGCTGCAAT
GGCAGATACTCATCTTTTCATTTCGAAAACTGCCCAGAAAAACCGCACTGTGACACATGTCAATCCATTAACGGAAAAAG
AAAAGACTGAGGAAATAAGTCGTATGATTTCCGGTGTTGAAATAACAGATTTAACTCGGCAGCATGCAGAAGAGTTGATT
GTTCAAGCCAGTCGAATGAAATAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1D7QUP0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

52.083

100

0.529

Multiple sequence alignment