Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   FORC39_RS08110 Genome accession   NZ_CP015817
Coordinates   1575426..1576049 (+) Length   207 a.a.
NCBI ID   WP_001208755.1    Uniprot ID   P65819
Organism   Staphylococcus aureus strain FORC_039     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1570426..1581049
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC39_RS08080 (FORC39_1411) - 1571399..1571866 (-) 468 WP_000966142.1 CcdC family protein -
  FORC39_RS08085 - 1571960..1572058 (-) 99 WP_031866183.1 hypothetical protein -
  FORC39_RS08090 (FORC39_1412) - 1572045..1572287 (-) 243 WP_000246909.1 YneF family protein -
  FORC39_RS08095 (FORC39_1413) recP/tkt 1572565..1574553 (-) 1989 WP_000481451.1 transketolase Machinery gene
  FORC39_RS08100 (FORC39_1414) - 1574674..1574913 (-) 240 WP_000071351.1 DUF896 domain-containing protein -
  FORC39_RS08105 (FORC39_1415) sosA 1575050..1575283 (-) 234 WP_000499650.1 DNA damage-induced cell division inhibitor SosA -
  FORC39_RS08110 (FORC39_1416) dinR/lexA 1575426..1576049 (+) 624 WP_001208755.1 transcriptional repressor LexA Regulator
  FORC39_RS08115 (FORC39_1417) - 1576429..1577445 (-) 1017 WP_170961871.1 CAP domain-containing protein -
  FORC39_RS08125 (FORC39_1418) guaC 1577467..1578444 (-) 978 WP_000688122.1 GMP reductase -
  FORC39_RS08130 (FORC39_1419) rpsN 1578601..1578870 (-) 270 WP_001085655.1 30S ribosomal protein S14 -
  FORC39_RS08135 (FORC39_1420) rpmG 1579324..1579473 (-) 150 WP_001265708.1 50S ribosomal protein L33 -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23331.55 Da        Isoelectric Point: 4.8811

>NTDB_id=154725 FORC39_RS08110 WP_001208755.1 1575426..1576049(+) (dinR/lexA) [Staphylococcus aureus strain FORC_039]
MRELTKRQSEIYNYIKQVVQMKGYPPSVREIGEAVGLASSSTVHGHLSRLEEKGYIRRDPTKPRAIEIVSDQTNDNINME
ETIHVPVIGKVTAGVPITAVENIEEYFPLPEHLTSTHNSDIFILNVVGDSMIEAGILDGDKVIVRSQTIAENGDIIVAMT
EEDEATVKRFYKEKNRYRLQPENSTMEPIYLDNVAVIGKVIGLYREM

Nucleotide


Download         Length: 624 bp        

>NTDB_id=154725 FORC39_RS08110 WP_001208755.1 1575426..1576049(+) (dinR/lexA) [Staphylococcus aureus strain FORC_039]
ATGAGAGAATTAACAAAACGACAAAGCGAAATATATAACTATATTAAACAAGTTGTTCAAATGAAAGGTTATCCGCCTAG
TGTTCGCGAAATTGGTGAAGCAGTTGGCTTAGCATCCAGTTCAACTGTTCATGGTCACCTTTCACGTCTTGAAGAAAAAG
GATATATAAGAAGAGATCCAACGAAACCACGTGCTATAGAAATTGTAAGTGATCAAACAAATGATAATATTAATATGGAA
GAAACGATTCATGTGCCAGTTATTGGTAAAGTCACAGCAGGTGTTCCTATTACCGCTGTAGAAAATATTGAAGAGTATTT
TCCATTACCTGAACACTTAACATCGACACATAATAGCGACATATTCATATTAAACGTCGTAGGCGACAGTATGATTGAGG
CTGGTATATTAGACGGAGACAAAGTAATTGTTCGCAGTCAAACCATAGCAGAAAATGGAGACATTATTGTTGCTATGACT
GAGGAAGATGAAGCAACTGTCAAACGCTTCTATAAAGAAAAAAATCGTTATCGATTACAACCTGAAAATAGTACAATGGA
GCCAATTTACCTCGACAATGTTGCTGTAATTGGGAAAGTAATTGGTTTGTACCGCGAAATGTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-201)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65819

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

66.341

99.034

0.657