Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   ACN91_RS21935 Genome accession   NZ_CP012483
Coordinates   4289804..4291630 (-) Length   608 a.a.
NCBI ID   WP_053565016.1    Uniprot ID   A0AAW5KY27
Organism   Bacillus cereus strain NJ-W     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 4284804..4296630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS21900 (ACN91_21930) - 4285231..4286028 (-) 798 WP_000673190.1 NAD kinase -
  ACN91_RS21905 (ACN91_21935) - 4286047..4286685 (-) 639 WP_001081482.1 GTP pyrophosphokinase family protein -
  ACN91_RS21910 (ACN91_21940) - 4286716..4287087 (-) 372 WP_001180005.1 hypothetical protein -
  ACN91_RS21915 (ACN91_21945) - 4287232..4287810 (+) 579 WP_000191118.1 CYTH domain-containing protein -
  ACN91_RS21920 (ACN91_21950) - 4287979..4288377 (+) 399 WP_000043386.1 hypothetical protein -
  ACN91_RS21925 (ACN91_21955) - 4288377..4289270 (+) 894 WP_053565015.1 ClpXP adapter SpxH family protein -
  ACN91_RS21930 (ACN91_21960) - 4289500..4289673 (+) 174 WP_000750354.1 hypothetical protein -
  ACN91_RS21935 (ACN91_21965) pepF 4289804..4291630 (-) 1827 WP_053565016.1 oligoendopeptidase F Regulator
  ACN91_RS21940 (ACN91_21970) - 4291681..4292925 (-) 1245 WP_053565017.1 competence protein CoiA family protein -
  ACN91_RS21945 (ACN91_21975) - 4293006..4294550 (-) 1545 WP_000799191.1 cardiolipin synthase -
  ACN91_RS21950 (ACN91_21980) mecA 4294623..4295306 (-) 684 WP_000350715.1 adaptor protein MecA Regulator
  ACN91_RS21955 (ACN91_21985) - 4295652..4296326 (+) 675 WP_053565018.1 TerC family protein -

Sequence

Protein


Download         Length: 608 a.a.        Molecular weight: 70142.47 Da        Isoelectric Point: 4.6183

>NTDB_id=154717 ACN91_RS21935 WP_053565016.1 4289804..4291630(-) (pepF) [Bacillus cereus strain NJ-W]
MSEQNKAKALPDRNEIEEASTWRLEDIFQTDAEWEKEFQAIKELLPKLTEFKGKLGDSADNLLEALQYEDEISMRLGKLY
TYAHMRYDQDTTNSVYQALNDRATNLYSQVSSSTAYIVPEILSISADTLQTFLKENRDLSVYEHALEEITRQRPHVLSEA
EEALLAEASEVMSSSSNTFGMLNNADLKFPSIKGEDGEEIEITHGRYIQFLESDDPRVREDAFKAVYETYGKFKNTFAST
LSGAVKRNNFNARVRKYDSARQAALSNNNIPEAVYDQLVETVNDNLHLLHRYIDIRKRALGLDELHMYDLYTPLVPEVKM
NVKYEEAQDLLLKSLNVLGDEYVDILKEAYENRWVDVYENKGKRSGAYSSGAYGTNPYILMNWHDNVNNLFTLAHEFGHS
VHSYYTRKTQPHVYGDYSIFVAEVASTCNEALLNDYLLKTTEDKKERLYLLNHYLEGFRGTVFRQTMFAEFEHIIHKKVQ
EGHAVTPDMLTEIYYDLNKKYFGDALVIDEEIGLEWSRIPHFYYNYYVYQYATGFSAATALSKQILEEGQPAVERYINEF
LKAGSSDYPIEVLKKAGVDMASPEPVKEALQVFEEKLNELEALLFEEK

Nucleotide


Download         Length: 1827 bp        

>NTDB_id=154717 ACN91_RS21935 WP_053565016.1 4289804..4291630(-) (pepF) [Bacillus cereus strain NJ-W]
ATGTCTGAACAAAACAAAGCGAAAGCATTACCAGATCGCAACGAGATTGAAGAAGCAAGTACGTGGCGATTAGAAGATAT
TTTCCAAACGGATGCAGAATGGGAAAAAGAATTCCAGGCTATTAAAGAGCTATTACCGAAGTTAACTGAATTTAAAGGGA
AACTTGGTGACTCTGCGGACAATTTACTTGAGGCATTGCAATATGAAGATGAAATTTCAATGCGATTAGGTAAGCTATAT
ACATATGCTCATATGCGTTACGATCAAGATACAACAAACTCTGTATATCAAGCATTAAATGATCGTGCAACAAATTTATA
TTCACAAGTATCTAGTAGCACAGCGTATATTGTGCCTGAAATTTTATCGATTTCAGCAGATACACTGCAAACATTCTTGA
AGGAAAATAGAGATTTAAGTGTATATGAACATGCATTAGAAGAAATTACACGTCAACGCCCGCACGTATTATCAGAAGCT
GAGGAGGCTTTATTAGCGGAAGCATCTGAAGTAATGAGTTCGTCAAGCAATACATTCGGTATGTTGAATAACGCGGATTT
AAAATTCCCATCTATTAAAGGTGAAGACGGAGAAGAAATAGAAATTACACATGGCCGTTACATTCAGTTTTTAGAAAGTG
ATGATCCTCGTGTTCGCGAAGATGCATTTAAAGCTGTATATGAAACGTATGGGAAATTTAAAAATACATTCGCAAGTACG
TTAAGTGGAGCAGTAAAACGTAATAATTTCAATGCGCGTGTTCGTAAATATGATTCTGCTCGCCAAGCTGCACTGAGCAA
TAATAATATTCCGGAAGCAGTATACGATCAACTCGTTGAAACGGTAAATGACAACTTACATTTATTACACCGTTACATCG
ATATTCGTAAGCGTGCATTAGGACTTGATGAGCTTCATATGTATGATTTATATACACCACTTGTACCAGAAGTGAAAATG
AATGTGAAATACGAAGAAGCGCAAGACCTTTTATTAAAATCTTTAAACGTACTTGGTGATGAATATGTTGATATTTTGAA
AGAGGCATATGAAAATCGCTGGGTAGATGTGTATGAGAATAAAGGAAAACGAAGCGGGGCATACTCATCTGGTGCATATG
GAACAAATCCGTATATTTTAATGAACTGGCATGATAATGTAAATAACTTATTTACACTTGCTCATGAGTTTGGTCATTCG
GTGCATAGTTACTATACAAGAAAAACACAACCGCACGTATATGGTGATTATTCCATCTTTGTAGCAGAAGTGGCATCTAC
TTGTAATGAAGCGCTTCTAAATGATTATTTATTAAAAACGACAGAAGATAAGAAAGAGCGTCTATATTTATTAAATCATT
ATTTAGAAGGGTTCCGTGGTACTGTATTCCGTCAAACGATGTTTGCAGAGTTTGAACATATTATTCATAAGAAAGTACAA
GAAGGACATGCTGTTACGCCAGATATGCTAACGGAAATCTACTATGATTTAAATAAGAAATATTTCGGTGACGCTTTAGT
AATCGACGAAGAGATTGGTTTAGAATGGTCTCGTATTCCACACTTCTACTACAACTATTACGTATATCAATACGCAACAG
GATTTAGTGCAGCGACAGCTCTATCTAAACAGATTTTAGAAGAAGGACAACCAGCAGTAGAACGTTATATTAACGAGTTC
TTAAAAGCAGGAAGCTCTGATTATCCAATTGAAGTGCTGAAAAAAGCAGGAGTAGATATGGCATCTCCTGAACCAGTAAA
AGAGGCACTACAAGTATTTGAAGAGAAATTAAATGAATTAGAAGCATTATTATTTGAAGAAAAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(211-591)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.916

97.533

0.487

Multiple sequence alignment