Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   ACN91_RS15920 Genome accession   NZ_CP012483
Coordinates   3133006..3133284 (-) Length   92 a.a.
NCBI ID   WP_000842216.1    Uniprot ID   A0A9W5QHH7
Organism   Bacillus cereus strain NJ-W     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 3128006..3138284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS15905 (ACN91_15935) - 3129492..3130151 (-) 660 WP_053564484.1 CatB-related O-acetyltransferase -
  ACN91_RS15910 (ACN91_15940) - 3130404..3131162 (-) 759 WP_053564485.1 TSUP family transporter -
  ACN91_RS15915 (ACN91_15945) - 3131230..3132480 (-) 1251 WP_053564486.1 hypothetical protein -
  ACN91_RS15920 (ACN91_15950) abrB 3133006..3133284 (-) 279 WP_000842216.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  ACN91_RS15925 (ACN91_15955) - 3133425..3134303 (-) 879 WP_053564487.1 helix-turn-helix domain-containing protein -
  ACN91_RS15930 (ACN91_15960) - 3134680..3134931 (+) 252 WP_000827555.1 LuxR C-terminal-related transcriptional regulator -
  ACN91_RS15935 (ACN91_15965) - 3135405..3136586 (-) 1182 WP_053564488.1 agmatine deiminase family protein -
  ACN91_RS15940 (ACN91_15970) - 3136891..3137493 (-) 603 WP_053564489.1 hypothetical protein -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10378.28 Da        Isoelectric Point: 10.0092

>NTDB_id=154710 ACN91_RS15920 WP_000842216.1 3133006..3133284(-) (abrB) [Bacillus cereus strain NJ-W]
MKSRGITRKADSMGRIVIPMEIRRSLGIVEKDSLEMFIEEDQIILRKYQSPRACALTGDISDSNISLANGKIIVSPNGME
LLIKKLQQYLLK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=154710 ACN91_RS15920 WP_000842216.1 3133006..3133284(-) (abrB) [Bacillus cereus strain NJ-W]
ATGAAATCAAGAGGAATTACTCGTAAAGCAGATAGCATGGGGCGTATTGTTATTCCAATGGAAATAAGACGGAGTTTAGG
AATTGTAGAAAAAGATTCTCTTGAAATGTTTATAGAAGAGGACCAGATTATTTTACGAAAATATCAATCACCAAGAGCTT
GTGCACTTACAGGGGATATTTCAGACAGCAATATTTCGTTAGCGAATGGGAAGATTATTGTAAGTCCAAACGGGATGGAA
CTGTTAATAAAGAAGTTACAGCAATATCTTTTAAAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-89)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

50

97.826

0.489

Multiple sequence alignment