Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   ACN91_RS07905 Genome accession   NZ_CP012483
Coordinates   1485102..1485536 (+) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus strain NJ-W     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1480102..1490536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS07885 (ACN91_07890) - 1481016..1482179 (-) 1164 WP_053563723.1 aminotransferase A -
  ACN91_RS07890 (ACN91_07895) - 1482302..1482502 (-) 201 WP_000929276.1 hypothetical protein -
  ACN91_RS07895 (ACN91_07900) kinB 1482813..1484087 (+) 1275 WP_000420372.1 sporulation sensor histidine kinase KinB -
  ACN91_RS07900 (ACN91_07905) - 1484126..1484875 (-) 750 WP_000388467.1 DUF3967 domain-containing protein -
  ACN91_RS07905 (ACN91_07910) nucA/comI 1485102..1485536 (+) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  ACN91_RS07910 (ACN91_07915) - 1485573..1485962 (+) 390 WP_000424024.1 competence protein ComJ -
  ACN91_RS07915 (ACN91_07920) metE 1486001..1488289 (-) 2289 WP_053563724.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  ACN91_RS07925 (ACN91_07930) - 1488801..1489358 (-) 558 WP_000062063.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=154705 ACN91_RS07905 WP_000811494.1 1485102..1485536(+) (nucA/comI) [Bacillus cereus strain NJ-W]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=154705 ACN91_RS07905 WP_000811494.1 1485102..1485536(+) (nucA/comI) [Bacillus cereus strain NJ-W]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCGAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCGTATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGGGGAGCAGGCTCTTGGGTAGGGAATAAGTTAGATAAATATC
CAGATGGTACGCGTGTGAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment