Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   ACN91_RS00215 Genome accession   NZ_CP012483
Coordinates   41258..41542 (+) Length   94 a.a.
NCBI ID   WP_000843036.1    Uniprot ID   A0A9W5VII1
Organism   Bacillus cereus strain NJ-W     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 36258..46542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACN91_RS00200 (ACN91_00200) rnmV 37081..37638 (-) 558 WP_000692837.1 ribonuclease M5 -
  ACN91_RS00205 (ACN91_00205) - 37854..38621 (-) 768 WP_000895840.1 TatD family hydrolase -
  ACN91_RS00210 (ACN91_00210) metG 38788..40797 (-) 2010 WP_071713453.1 methionine--tRNA ligase -
  ACN91_RS00215 (ACN91_00215) abrB 41258..41542 (+) 285 WP_000843036.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  ACN91_RS00220 (ACN91_00220) rsmI 41563..42438 (-) 876 WP_000267824.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  ACN91_RS00225 (ACN91_00225) - 42407..42697 (-) 291 WP_000414350.1 GIY-YIG nuclease family protein -
  ACN91_RS00230 (ACN91_00230) - 42684..43424 (-) 741 WP_001055355.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ACN91_RS00235 (ACN91_00235) yabA 43507..43857 (-) 351 WP_000412063.1 DNA replication initiation control protein YabA -
  ACN91_RS00240 (ACN91_00240) - 43872..44699 (-) 828 WP_000272429.1 stage 0 sporulation family protein -
  ACN91_RS00245 (ACN91_00245) holB 44705..45688 (-) 984 WP_000978578.1 DNA polymerase III subunit delta' -
  ACN91_RS00250 (ACN91_00250) tmk 45724..46350 (-) 627 WP_000677220.1 dTMP kinase -

Sequence

Protein


Download         Length: 94 a.a.        Molecular weight: 10490.17 Da        Isoelectric Point: 4.7174

>NTDB_id=154683 ACN91_RS00215 WP_000843036.1 41258..41542(+) (abrB) [Bacillus cereus strain NJ-W]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLSLAEGKIILSKEGAE
QILNELQDYIETAK

Nucleotide


Download         Length: 285 bp        

>NTDB_id=154683 ACN91_RS00215 WP_000843036.1 41258..41542(+) (abrB) [Bacillus cereus strain NJ-W]
ATGAAATCTACTGGTATTGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGACGCTCTTGAAATCTATGTTGATGACGAAAAAATCATCTTAAAGAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGACGGTAACCTTTCTTTAGCTGAAGGTAAAATCATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-89)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-50)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

85.106

100

0.851

Multiple sequence alignment