Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AMR71_RS08195 | Genome accession | NZ_CP012482 |
| Coordinates | 1612501..1613571 (+) | Length | 356 a.a. |
| NCBI ID | WP_081038956.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain NJ-V2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1607501..1618571
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AMR71_RS08165 (AMR71_08165) | - | 1608753..1609067 (+) | 315 | WP_017367597.1 | MTH1187 family thiamine-binding protein | - |
| AMR71_RS19430 | - | 1609092..1609265 (-) | 174 | WP_003217333.1 | DUF2759 domain-containing protein | - |
| AMR71_RS08170 (AMR71_08170) | - | 1609426..1610064 (+) | 639 | WP_017357989.1 | MBL fold metallo-hydrolase | - |
| AMR71_RS08175 (AMR71_08175) | - | 1610113..1610355 (-) | 243 | WP_003217440.1 | DUF2626 domain-containing protein | - |
| AMR71_RS08180 (AMR71_08180) | - | 1610568..1610948 (+) | 381 | WP_007501232.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| AMR71_RS08190 (AMR71_08190) | - | 1611174..1612043 (+) | 870 | WP_007501231.1 | STAS domain-containing protein | - |
| AMR71_RS08195 (AMR71_08195) | comGA | 1612501..1613571 (+) | 1071 | WP_081038956.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AMR71_RS08200 (AMR71_08200) | comGB | 1613552..1614592 (+) | 1041 | WP_057079310.1 | competence type IV pilus assembly protein ComGB | - |
| AMR71_RS08205 (AMR71_08205) | comGC | 1614609..1614902 (+) | 294 | WP_057079311.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AMR71_RS08210 (AMR71_08210) | comGD | 1614895..1615341 (+) | 447 | WP_057079312.1 | competence type IV pilus minor pilin ComGD | - |
| AMR71_RS08215 (AMR71_08215) | comGE | 1615325..1615639 (+) | 315 | WP_057079313.1 | competence type IV pilus minor pilin ComGE | - |
| AMR71_RS08220 (AMR71_08220) | comGF | 1615581..1616078 (+) | 498 | WP_057079314.1 | competence type IV pilus minor pilin ComGF | - |
| AMR71_RS08225 (AMR71_08225) | - | 1616075..1616458 (+) | 384 | WP_057079315.1 | competence type IV pilus minor pilin ComGG | - |
| AMR71_RS08230 (AMR71_08230) | - | 1616519..1616707 (+) | 189 | WP_017367591.1 | YqzE family protein | - |
| AMR71_RS08235 (AMR71_08235) | - | 1616742..1617068 (-) | 327 | WP_048001387.1 | DUF3889 domain-containing protein | - |
| AMR71_RS08240 (AMR71_08240) | tapA | 1617321..1617848 (+) | 528 | WP_017367589.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AMR71_RS08245 (AMR71_08245) | sipW | 1617899..1618471 (+) | 573 | WP_017357979.1 | signal peptidase I SipW | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40373.72 Da Isoelectric Point: 9.0449
>NTDB_id=154648 AMR71_RS08195 WP_081038956.1 1612501..1613571(+) (comGA) [Bacillus altitudinis strain NJ-V2]
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASF
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASF
Nucleotide
Download Length: 1071 bp
>NTDB_id=154648 AMR71_RS08195 WP_081038956.1 1612501..1613571(+) (comGA) [Bacillus altitudinis strain NJ-V2]
TTGTATGGTATTGAATATTTGGGACAAGAGCTACTAGAAGAGGCGTGTCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGGTCATTGGCT
GTGATGCTAAGACGCGGTCAAGTGTTTGTTCGGCTCTCTACACTACCGACTGTAAATGATGAAAGTCTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATTCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCCAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAT
GCAAAAAATGCAAAAGGAGCTCTTTATCGAATGCTGGAATTTGGAGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGAC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGAGAATAC
GCTCATTCGTCATACGAAACACTCCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGCTGGGTTTATGAAGAAGCGAGCTTCTAA
TTGTATGGTATTGAATATTTGGGACAAGAGCTACTAGAAGAGGCGTGTCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGGTCATTGGCT
GTGATGCTAAGACGCGGTCAAGTGTTTGTTCGGCTCTCTACACTACCGACTGTAAATGATGAAAGTCTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATTCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCCAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAT
GCAAAAAATGCAAAAGGAGCTCTTTATCGAATGCTGGAATTTGGAGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGAC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGAGAATAC
GCTCATTCGTCATACGAAACACTCCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGCTGGGTTTATGAAGAAGCGAGCTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
65.254 |
99.438 |
0.649 |