Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A7B19_RS03465 | Genome accession | NZ_CP015726 |
| Coordinates | 961045..963582 (-) | Length | 845 a.a. |
| NCBI ID | WP_063734776.1 | Uniprot ID | - |
| Organism | Streptomyces sp. RTd22 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 956045..968582
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7B19_RS03445 | - | 956498..956722 (+) | 225 | WP_009720511.1 | DUF5988 family protein | - |
| A7B19_RS03450 | - | 956864..958747 (+) | 1884 | WP_063734779.1 | Xaa-Pro dipeptidyl-peptidase | - |
| A7B19_RS03455 | - | 958716..959585 (-) | 870 | WP_063734778.1 | class I SAM-dependent methyltransferase | - |
| A7B19_RS03460 | - | 959856..961028 (+) | 1173 | WP_063734777.1 | CapA family protein | - |
| A7B19_RS03465 | clpC | 961045..963582 (-) | 2538 | WP_063734776.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| A7B19_RS03470 | - | 963614..964693 (-) | 1080 | WP_234365323.1 | PP2C family protein-serine/threonine phosphatase | - |
| A7B19_RS03475 | - | 964795..965877 (-) | 1083 | WP_234365732.1 | MFS transporter | - |
| A7B19_RS52090 | - | 965799..966002 (-) | 204 | WP_234365331.1 | hypothetical protein | - |
| A7B19_RS03480 | - | 966088..967404 (-) | 1317 | WP_079152345.1 | M20 family metallopeptidase | - |
| A7B19_RS03485 | - | 967453..968352 (+) | 900 | WP_063734775.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 845 a.a. Molecular weight: 92260.47 Da Isoelectric Point: 5.2037
>NTDB_id=154586 A7B19_RS03465 WP_063734776.1 961045..963582(-) (clpC) [Streptomyces sp. RTd22]
MGSGNDGPDDFGPDPLGDFLARFLGTGPGGQRSDRHVDFGRLMSETARHLVSSAASYAAEHGSTDLDTEHLLRAALTAEP
TRTMVSRAGADPDQLAAEIDRQAGDGPPRGSVAVTPAVKRALLDAHEIARARGSSYIGPEHVLIALAANRDSTAGQILHA
AHFEPRSTPPAGRAAPVPGADQRPVADRRGTPTLDRYGRDLTDLAREGRIDPVIGRDEEIEQSIEVLARRGKNNPVLIGE
AGVGKTAVVEGLAQRIADADVPDILLGRRVIQLDFAGVVAGTRYRGDFEQRLTAIIDEIRAHSDELIVFIDELHTVVGAG
GGSEGGTMDASNLLKPALARGELHVMGASTLQEYRQYIEKDAALARRFQPIMVPEPTPAAAVSILHGLRDRHEAHHQVRY
TDEALFAAVELADRYLADRFLPDKAIDLMDQAGARVRLRSSARGTDLRALERELEQLTRDKDQAVAAEQYERATALRDRI
AELGARITEGSGAQFHGSRVSEVTVEDIADIVSRQTGIPVSSLTQEERERLLGLEEHLHKRVIGQEEAVAAVSDAVLRSR
AGLADPHRPSGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQEKHTVSRLVGAPPGYVGHEEAGQLTEAVRR
QPYALLLMDEVEKGHADVFNILLQVLDDGRLTDAQGRTVDFKNTVIVMTSNLGSEAITGRGAVLGFGGGDAEADEASRRE
RVLRPLREHFRPEFLNRIDEIVIFRRLADEQLRQITDVLLEETRRRMRAQDIPVDFTPAAVDWLARHGHQPEYGARPLRR
TIQREVDNPLSRMLLGGELRPHSPVEVDVEDDTLAFHIEQEPAAT
MGSGNDGPDDFGPDPLGDFLARFLGTGPGGQRSDRHVDFGRLMSETARHLVSSAASYAAEHGSTDLDTEHLLRAALTAEP
TRTMVSRAGADPDQLAAEIDRQAGDGPPRGSVAVTPAVKRALLDAHEIARARGSSYIGPEHVLIALAANRDSTAGQILHA
AHFEPRSTPPAGRAAPVPGADQRPVADRRGTPTLDRYGRDLTDLAREGRIDPVIGRDEEIEQSIEVLARRGKNNPVLIGE
AGVGKTAVVEGLAQRIADADVPDILLGRRVIQLDFAGVVAGTRYRGDFEQRLTAIIDEIRAHSDELIVFIDELHTVVGAG
GGSEGGTMDASNLLKPALARGELHVMGASTLQEYRQYIEKDAALARRFQPIMVPEPTPAAAVSILHGLRDRHEAHHQVRY
TDEALFAAVELADRYLADRFLPDKAIDLMDQAGARVRLRSSARGTDLRALERELEQLTRDKDQAVAAEQYERATALRDRI
AELGARITEGSGAQFHGSRVSEVTVEDIADIVSRQTGIPVSSLTQEERERLLGLEEHLHKRVIGQEEAVAAVSDAVLRSR
AGLADPHRPSGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMSEYQEKHTVSRLVGAPPGYVGHEEAGQLTEAVRR
QPYALLLMDEVEKGHADVFNILLQVLDDGRLTDAQGRTVDFKNTVIVMTSNLGSEAITGRGAVLGFGGGDAEADEASRRE
RVLRPLREHFRPEFLNRIDEIVIFRRLADEQLRQITDVLLEETRRRMRAQDIPVDFTPAAVDWLARHGHQPEYGARPLRR
TIQREVDNPLSRMLLGGELRPHSPVEVDVEDDTLAFHIEQEPAAT
Nucleotide
Download Length: 2538 bp
>NTDB_id=154586 A7B19_RS03465 WP_063734776.1 961045..963582(-) (clpC) [Streptomyces sp. RTd22]
ATGGGCAGCGGGAACGACGGCCCTGACGACTTCGGGCCAGACCCACTCGGCGACTTCCTCGCACGCTTCCTCGGAACCGG
GCCCGGCGGACAGCGGTCCGATCGCCATGTCGACTTCGGCCGGCTCATGAGCGAGACCGCGCGCCACCTCGTCTCCTCCG
CCGCGTCGTACGCCGCCGAACACGGCAGCACCGACCTCGACACCGAACACCTGCTGCGGGCGGCGCTCACCGCCGAACCC
ACGCGCACCATGGTCTCCCGCGCCGGGGCCGACCCCGACCAGCTCGCCGCCGAGATCGACCGGCAGGCGGGGGACGGCCC
GCCACGCGGCTCGGTCGCCGTCACTCCCGCCGTCAAGCGGGCGCTGCTCGACGCCCACGAGATCGCCCGGGCCCGCGGCT
CCTCGTACATCGGCCCCGAACACGTACTGATCGCCCTCGCCGCCAACCGGGACTCCACCGCCGGGCAGATCCTCCACGCC
GCACACTTCGAACCCCGCAGCACGCCCCCGGCCGGCCGTGCGGCCCCGGTCCCCGGCGCCGACCAGCGGCCCGTGGCGGA
CCGCCGCGGCACCCCGACCCTCGACCGGTACGGCCGCGATCTGACCGACCTGGCCCGGGAGGGCCGCATCGACCCGGTGA
TCGGCCGCGACGAGGAGATCGAGCAGAGCATCGAGGTGCTGGCCCGGCGCGGCAAGAACAACCCCGTCCTGATCGGCGAG
GCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGGCTGGCGCAGCGCATCGCCGACGCCGACGTGCCGGACATCCTGCTCGG
CCGCCGCGTCATCCAGCTCGACTTCGCGGGCGTCGTGGCCGGGACCCGCTACCGCGGCGACTTCGAACAGCGCCTCACCG
CCATCATCGACGAGATCCGCGCCCACTCCGACGAACTCATCGTCTTCATCGACGAACTGCACACCGTCGTCGGCGCGGGC
GGCGGCTCCGAGGGCGGCACGATGGACGCCAGCAATCTGCTCAAGCCCGCCCTCGCCCGCGGCGAGCTGCACGTCATGGG
CGCCAGCACACTCCAGGAGTACCGCCAGTACATCGAGAAGGACGCGGCACTCGCCCGCCGCTTCCAGCCCATCATGGTCC
CCGAACCCACCCCCGCGGCCGCCGTCTCCATCCTGCACGGGCTCCGCGACCGCCACGAGGCACACCACCAGGTCCGCTAC
ACCGACGAGGCGCTGTTCGCGGCCGTCGAACTCGCCGACCGCTACCTCGCCGACCGCTTCCTCCCGGACAAGGCCATCGA
CCTGATGGACCAGGCGGGCGCCCGGGTACGGCTGCGCTCCAGCGCCCGCGGCACCGATCTGCGCGCCCTGGAGCGCGAGC
TGGAGCAGCTGACCCGCGACAAGGACCAGGCCGTCGCCGCCGAGCAGTACGAACGCGCCACCGCCCTGCGCGACCGCATC
GCCGAACTCGGCGCCCGTATCACCGAGGGATCCGGCGCCCAGTTCCACGGCTCCCGGGTCTCCGAGGTCACCGTCGAGGA
CATCGCCGACATCGTCTCCCGGCAGACCGGCATCCCCGTCAGCAGCCTCACCCAGGAGGAGCGCGAGCGGCTGCTCGGCC
TGGAAGAACACCTCCACAAGCGGGTCATCGGCCAGGAGGAGGCCGTCGCCGCCGTCTCGGACGCCGTGCTGCGCTCCCGG
GCCGGACTCGCCGACCCCCACCGCCCCAGCGGCAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACTCGC
CCGTGCGCTGGCCGAGGCGCTCTTCGGCAGCGAGGACCGGATGATCCGGCTCGACATGAGCGAATACCAGGAGAAGCACA
CCGTCAGCCGCCTCGTCGGCGCGCCACCCGGATACGTCGGCCACGAGGAGGCCGGACAGCTGACCGAGGCGGTGCGCAGA
CAGCCGTACGCACTGCTGCTCATGGACGAGGTGGAGAAGGGCCACGCGGACGTGTTCAACATCCTGCTCCAAGTGCTCGA
CGACGGCAGACTGACCGACGCCCAGGGCCGCACCGTCGACTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCGGCT
CCGAGGCCATCACCGGGCGCGGCGCCGTCCTCGGCTTCGGCGGCGGCGACGCCGAAGCCGACGAGGCGTCCCGCCGCGAG
CGGGTCCTGCGCCCGCTGCGCGAACACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTGATCTTCCGCCGGCT
CGCCGACGAACAGCTGCGCCAGATCACCGATGTGCTGCTGGAGGAGACCCGCCGCCGGATGCGCGCCCAGGACATCCCCG
TCGACTTCACCCCCGCCGCCGTCGACTGGCTGGCCCGCCACGGCCATCAGCCGGAGTACGGCGCCCGCCCGCTGCGCCGT
ACCATCCAGCGTGAGGTCGACAACCCGCTCTCCCGGATGCTGCTCGGCGGCGAGCTGAGGCCGCACAGCCCGGTCGAAGT
CGACGTGGAGGACGACACGTTGGCGTTCCACATCGAGCAGGAGCCCGCGGCCACCTGA
ATGGGCAGCGGGAACGACGGCCCTGACGACTTCGGGCCAGACCCACTCGGCGACTTCCTCGCACGCTTCCTCGGAACCGG
GCCCGGCGGACAGCGGTCCGATCGCCATGTCGACTTCGGCCGGCTCATGAGCGAGACCGCGCGCCACCTCGTCTCCTCCG
CCGCGTCGTACGCCGCCGAACACGGCAGCACCGACCTCGACACCGAACACCTGCTGCGGGCGGCGCTCACCGCCGAACCC
ACGCGCACCATGGTCTCCCGCGCCGGGGCCGACCCCGACCAGCTCGCCGCCGAGATCGACCGGCAGGCGGGGGACGGCCC
GCCACGCGGCTCGGTCGCCGTCACTCCCGCCGTCAAGCGGGCGCTGCTCGACGCCCACGAGATCGCCCGGGCCCGCGGCT
CCTCGTACATCGGCCCCGAACACGTACTGATCGCCCTCGCCGCCAACCGGGACTCCACCGCCGGGCAGATCCTCCACGCC
GCACACTTCGAACCCCGCAGCACGCCCCCGGCCGGCCGTGCGGCCCCGGTCCCCGGCGCCGACCAGCGGCCCGTGGCGGA
CCGCCGCGGCACCCCGACCCTCGACCGGTACGGCCGCGATCTGACCGACCTGGCCCGGGAGGGCCGCATCGACCCGGTGA
TCGGCCGCGACGAGGAGATCGAGCAGAGCATCGAGGTGCTGGCCCGGCGCGGCAAGAACAACCCCGTCCTGATCGGCGAG
GCGGGCGTCGGCAAGACCGCCGTCGTCGAGGGGCTGGCGCAGCGCATCGCCGACGCCGACGTGCCGGACATCCTGCTCGG
CCGCCGCGTCATCCAGCTCGACTTCGCGGGCGTCGTGGCCGGGACCCGCTACCGCGGCGACTTCGAACAGCGCCTCACCG
CCATCATCGACGAGATCCGCGCCCACTCCGACGAACTCATCGTCTTCATCGACGAACTGCACACCGTCGTCGGCGCGGGC
GGCGGCTCCGAGGGCGGCACGATGGACGCCAGCAATCTGCTCAAGCCCGCCCTCGCCCGCGGCGAGCTGCACGTCATGGG
CGCCAGCACACTCCAGGAGTACCGCCAGTACATCGAGAAGGACGCGGCACTCGCCCGCCGCTTCCAGCCCATCATGGTCC
CCGAACCCACCCCCGCGGCCGCCGTCTCCATCCTGCACGGGCTCCGCGACCGCCACGAGGCACACCACCAGGTCCGCTAC
ACCGACGAGGCGCTGTTCGCGGCCGTCGAACTCGCCGACCGCTACCTCGCCGACCGCTTCCTCCCGGACAAGGCCATCGA
CCTGATGGACCAGGCGGGCGCCCGGGTACGGCTGCGCTCCAGCGCCCGCGGCACCGATCTGCGCGCCCTGGAGCGCGAGC
TGGAGCAGCTGACCCGCGACAAGGACCAGGCCGTCGCCGCCGAGCAGTACGAACGCGCCACCGCCCTGCGCGACCGCATC
GCCGAACTCGGCGCCCGTATCACCGAGGGATCCGGCGCCCAGTTCCACGGCTCCCGGGTCTCCGAGGTCACCGTCGAGGA
CATCGCCGACATCGTCTCCCGGCAGACCGGCATCCCCGTCAGCAGCCTCACCCAGGAGGAGCGCGAGCGGCTGCTCGGCC
TGGAAGAACACCTCCACAAGCGGGTCATCGGCCAGGAGGAGGCCGTCGCCGCCGTCTCGGACGCCGTGCTGCGCTCCCGG
GCCGGACTCGCCGACCCCCACCGCCCCAGCGGCAGCTTCCTCTTCCTCGGCCCCACCGGCGTCGGCAAGACCGAACTCGC
CCGTGCGCTGGCCGAGGCGCTCTTCGGCAGCGAGGACCGGATGATCCGGCTCGACATGAGCGAATACCAGGAGAAGCACA
CCGTCAGCCGCCTCGTCGGCGCGCCACCCGGATACGTCGGCCACGAGGAGGCCGGACAGCTGACCGAGGCGGTGCGCAGA
CAGCCGTACGCACTGCTGCTCATGGACGAGGTGGAGAAGGGCCACGCGGACGTGTTCAACATCCTGCTCCAAGTGCTCGA
CGACGGCAGACTGACCGACGCCCAGGGCCGCACCGTCGACTTCAAGAACACCGTCATCGTCATGACCAGCAACCTCGGCT
CCGAGGCCATCACCGGGCGCGGCGCCGTCCTCGGCTTCGGCGGCGGCGACGCCGAAGCCGACGAGGCGTCCCGCCGCGAG
CGGGTCCTGCGCCCGCTGCGCGAACACTTCCGGCCCGAGTTCCTCAACCGCATCGACGAGATCGTGATCTTCCGCCGGCT
CGCCGACGAACAGCTGCGCCAGATCACCGATGTGCTGCTGGAGGAGACCCGCCGCCGGATGCGCGCCCAGGACATCCCCG
TCGACTTCACCCCCGCCGCCGTCGACTGGCTGGCCCGCCACGGCCATCAGCCGGAGTACGGCGCCCGCCCGCTGCGCCGT
ACCATCCAGCGTGAGGTCGACAACCCGCTCTCCCGGATGCTGCTCGGCGGCGAGCTGAGGCCGCACAGCCCGGTCGAAGT
CGACGTGGAGGACGACACGTTGGCGTTCCACATCGAGCAGGAGCCCGCGGCCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
49.193 |
95.266 |
0.469 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.056 |
94.556 |
0.426 |
| clpC | Streptococcus pneumoniae Rx1 |
42.395 |
98.817 |
0.419 |
| clpC | Streptococcus pneumoniae TIGR4 |
42.395 |
98.817 |
0.419 |
| clpC | Streptococcus pneumoniae D39 |
42.395 |
98.817 |
0.419 |
| clpC | Streptococcus mutans UA159 |
42.303 |
97.633 |
0.413 |
| clpC | Streptococcus thermophilus LMD-9 |
46.032 |
89.467 |
0.412 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.455 |
89.822 |
0.408 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.19 |
80.355 |
0.395 |
| clpE | Streptococcus mutans UA159 |
51.823 |
74.675 |
0.387 |
| clpE | Streptococcus pneumoniae Rx1 |
50.562 |
73.728 |
0.373 |
| clpE | Streptococcus pneumoniae D39 |
50.562 |
73.728 |
0.373 |
| clpE | Streptococcus pneumoniae TIGR4 |
50.562 |
73.728 |
0.373 |
| clpE | Streptococcus pneumoniae R6 |
50.562 |
73.728 |
0.373 |