Detailed information NTG0154577

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: AMM49_RS01085
• Genome accession: NZ_CP012480
• Coordinates: 172338..173270 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138503.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain NGBS128
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 167338..178270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AMM49_RS01065 (AMM49_01060)	-	167551..169209 (+)	1659	WP_001118750.1	peptide ABC transporter substrate-binding protein	-
AMM49_RS01070 (AMM49_01065)	-	169324..170238 (+)	915	WP_000598967.1	ABC transporter permease	-
AMM49_RS01075 (AMM49_01070)	-	170248..171279 (+)	1032	WP_000764053.1	ABC transporter permease	-
AMM49_RS01080 (AMM49_01075)	oppD	171292..172341 (+)	1050	WP_000410289.1	ABC transporter ATP-binding protein	Regulator
AMM49_RS01085 (AMM49_01080)	amiF	172338..173270 (+)	933	WP_000138503.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34869.74 Da
• Isoelectric Point: 6.8964

>NTDB_id=154577 AMM49_RS01085 WP_000138503.1 172338..173270(+) (amiF) [Streptococcus agalactiae strain NGBS128]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNKPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=154577 AMM49_RS01085 WP_000138503.1 172338..173270(+) (amiF) [Streptococcus agalactiae strain NGBS128]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGCGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAAACCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.221	99.355	0.539
amiF	Streptococcus thermophilus LMG 18311	53.896	99.355	0.535
amiF	Streptococcus salivarius strain HSISS4	54.098	98.387	0.532