Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DE10444_RS09235 | Genome accession | NZ_CP012392 |
| Coordinates | 1779243..1779842 (+) | Length | 199 a.a. |
| NCBI ID | WP_002214520.1 | Uniprot ID | Q4W563 |
| Organism | Neisseria meningitidis strain DE10444 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1774243..1784842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DE10444_RS09220 (DE10444_1715) | yihA | 1774827..1775456 (+) | 630 | WP_002227620.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| DE10444_RS09225 (DE10444_1716) | - | 1775577..1777973 (-) | 2397 | WP_002219786.1 | penicillin-binding protein 1A | - |
| DE10444_RS09230 (DE10444_1717) | pilM | 1778125..1779240 (+) | 1116 | WP_002229867.1 | type IV pilus biogenesis protein PilM | - |
| DE10444_RS09235 (DE10444_1718) | pilN | 1779243..1779842 (+) | 600 | WP_002214520.1 | PilN domain-containing protein | Machinery gene |
| DE10444_RS09240 (DE10444_1719) | - | 1779843..1780490 (+) | 648 | WP_002217908.1 | type 4a pilus biogenesis protein PilO | - |
| DE10444_RS09245 (DE10444_1720) | pilP | 1780508..1781053 (+) | 546 | WP_002214522.1 | pilus assembly protein PilP | Machinery gene |
| DE10444_RS09250 (DE10444_1721) | pilQ | 1781072..1783357 (+) | 2286 | WP_065824990.1 | type IV pilus secretin PilQ | Machinery gene |
| DE10444_RS09255 (DE10444_1722) | - | 1784303..1784815 (+) | 513 | WP_002219790.1 | shikimate kinase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22257.48 Da Isoelectric Point: 9.5493
>NTDB_id=154137 DE10444_RS09235 WP_002214520.1 1779243..1779842(+) (pilN) [Neisseria meningitidis strain DE10444]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYLFIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQLKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=154137 DE10444_RS09235 WP_002214520.1 1779243..1779842(+) (pilN) [Neisseria meningitidis strain DE10444]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAGCGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGTGCCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAACCAGT
CGGAAAGAAACACGCTGCTGGAAACCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGCTCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTGACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
100 |
100 |
1 |