Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   DE10444_RS09130 Genome accession   NZ_CP012392
Coordinates   1755546..1757588 (-) Length   680 a.a.
NCBI ID   WP_002230821.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DE10444     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1750546..1762588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE10444_RS09095 (DE10444_1692) - 1750568..1751194 (-) 627 WP_002234634.1 secretion protein -
  DE10444_RS09100 - 1751255..1751608 (-) 354 WP_002234250.1 hypothetical protein -
  DE10444_RS14150 (DE10444_1695) - 1751601..1751828 (-) 228 WP_002234251.1 hypothetical protein -
  DE10444_RS09110 (DE10444_1696) - 1751837..1752991 (-) 1155 WP_002234252.1 cupin domain-containing protein -
  DE10444_RS09120 (DE10444_1697) - 1753245..1753526 (+) 282 WP_002221438.1 hypothetical protein -
  DE10444_RS09125 (DE10444_1698) argC 1753523..1754566 (+) 1044 WP_002230819.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  DE10444_RS13555 - 1754717..1754833 (-) 117 Protein_1705 IS5/IS1182 family transposase -
  DE10444_RS09130 (DE10444_1699) recG 1755546..1757588 (-) 2043 WP_002230821.1 ATP-dependent DNA helicase RecG Machinery gene
  DE10444_RS09135 (DE10444_1700) secB 1757674..1758117 (-) 444 WP_002229859.1 protein-export chaperone SecB -
  DE10444_RS09140 (DE10444_1701) grxC 1758138..1758395 (-) 258 WP_002221441.1 glutaredoxin 3 -
  DE10444_RS09145 (DE10444_1702) rng 1758608..1760101 (+) 1494 WP_002230820.1 ribonuclease G -
  DE10444_RS09150 (DE10444_1703) - 1760136..1761386 (-) 1251 WP_002219777.1 ATP-binding protein -
  DE10444_RS09155 (DE10444_1704) - 1761382..1761556 (-) 175 Protein_1711 response regulator -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 75017.93 Da        Isoelectric Point: 7.2642

>NTDB_id=154136 DE10444_RS09130 WP_002230821.1 1755546..1757588(-) (recG) [Neisseria meningitidis strain DE10444]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLQHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVSGTA
AALGGDGTLTQALRHALPFALTDAQEKVVSEICRDMAQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGLEVVWLSGSQRKKAKDEAKAKLADGTVKIAVGTHALFSDDVEFQNLGLVIVDEQHRFGVAQRL
ALKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=154136 DE10444_RS09130 WP_002230821.1 1755546..1757588(-) (recG) [Neisseria meningitidis strain DE10444]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCAACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTCGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGACGAACTTTTGGCGCAACAGTTGTCCATGCGGCTGGCGAGACAGAAGCGCGTCAGCGGCACGGCG
GCGGCATTGGGCGGCGACGGTACATTGACGCAAGCCCTGCGCCACGCCTTACCGTTTGCCCTGACTGATGCACAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGACATGGCGCAAACCCACCCCATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCA
AAACCATCGTCGCCGCCTTGTCTGCTTTGACGGCTATTGAATCCGGCGCACAGGTGGCTGTAATGGCGCCGACCGAAATC
CTTGCCGAACAGCACTTCATCAAGTTCAAACAATGGCTTGAGCCGTTGGGTCTCGAAGTTGTTTGGCTTTCCGGCAGTCA
GCGCAAAAAAGCCAAGGATGAAGCCAAAGCCAAACTGGCTGACGGCACCGTCAAAATCGCCGTCGGCACGCATGCCCTGT
TTTCAGACGACGTCGAGTTCCAAAATTTGGGCTTGGTGATTGTGGACGAACAACACCGCTTCGGTGTCGCTCAACGCCTT
GCCCTCAAAAACAAAGGGCGCGACGTCCATCAATTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGAGCTGAATGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAACGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTGCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCAGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGTTGAAAGTGATTTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACTTACACCTTTTGGAACAAGCGCGCGAAATCGCCCCGATACTGATTGAGCAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGATGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-419)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

RecG wedge domain (RecG_wedge)

(15-164)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

97.206

100

0.972

Multiple sequence alignment