Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DE8669_RS06925 Genome accession   NZ_CP012391
Coordinates   1354348..1354809 (-) Length   153 a.a.
NCBI ID   WP_002235957.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DE8669     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1349348..1359809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DE8669_RS06900 (DE8669_1295) surE 1350868..1351614 (+) 747 WP_002237186.1 5'/3'-nucleotidase SurE -
  DE8669_RS06905 (DE8669_1296) - 1351870..1353117 (+) 1248 WP_002234058.1 M23 family metallopeptidase -
  DE8669_RS06910 (DE8669_1297) - 1353478..1353960 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  DE8669_RS13880 (DE8669_1298) - 1354113..1354274 (-) 162 WP_002232730.1 hypothetical protein -
  DE8669_RS06925 (DE8669_1299) recX 1354348..1354809 (-) 462 WP_002235957.1 recombination regulator RecX Regulator
  DE8669_RS06930 (DE8669_1300) - 1354884..1355594 (-) 711 WP_002216874.1 phosphoglycolate phosphatase -
  DE8669_RS06940 (DE8669_1301) - 1356001..1357266 (+) 1266 WP_014581011.1 Glu/Leu/Phe/Val family dehydrogenase -
  DE8669_RS06945 (DE8669_1302) - 1357323..1358129 (-) 807 WP_065826054.1 DUF4198 domain-containing protein -
  DE8669_RS06950 (DE8669_1303) - 1358473..1358682 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17791.07 Da        Isoelectric Point: 9.9314

>NTDB_id=154082 DE8669_RS06925 WP_002235957.1 1354348..1354809(-) (recX) [Neisseria meningitidis strain DE8669]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQTAIDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=154082 DE8669_RS06925 WP_002235957.1 1354348..1354809(-) (recX) [Neisseria meningitidis strain DE8669]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAAGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGACCGCCATAGACGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTTAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.732

100

0.967

Multiple sequence alignment