Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   AS891_RS05405 Genome accession   NZ_CP015375
Coordinates   1044000..1044713 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis subsp. subtilis strain KCTC 3135     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1039000..1049713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS891_RS05370 (AS891_05365) rppI 1039246..1039722 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  AS891_RS05375 (AS891_05370) rapZ 1039747..1040634 (+) 888 WP_003243903.1 RNase adapter RapZ -
  AS891_RS05380 (AS891_05375) mgfK 1040636..1041589 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  AS891_RS05385 (AS891_05380) whiA 1041612..1042562 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  AS891_RS05390 (AS891_05385) crh 1042586..1042843 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  AS891_RS05395 (AS891_05390) yvcN 1042844..1043608 (+) 765 WP_009968228.1 arylamine N-acetyltransferase family protein -
  AS891_RS05400 (AS891_05395) yvzJ 1043644..1043853 (-) 210 WP_003243327.1 lipoprotein -
  AS891_RS05405 (AS891_05400) braR 1044000..1044713 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  AS891_RS05410 (AS891_05405) psdS 1044707..1045777 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  AS891_RS05415 (AS891_05410) psdA 1045860..1046639 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  AS891_RS05420 (AS891_05415) psdB 1046614..1048554 (+) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  AS891_RS05425 (AS891_05420) ghrB 1048592..1049569 (-) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=153590 AS891_RS05405 WP_003244535.1 1044000..1044713(+) (braR) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=153590 AS891_RS05405 WP_003244535.1 1044000..1044713(+) (braR) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43