Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   AS891_RS02100 Genome accession   NZ_CP015375
Coordinates   405706..406554 (+) Length   282 a.a.
NCBI ID   WP_003226832.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis strain KCTC 3135     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 400706..411554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AS891_RS02080 (AS891_02080) rsmG 402521..403240 (+) 720 WP_003243029.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  AS891_RS02085 (AS891_02085) noc 403362..404213 (+) 852 WP_003226829.1 nucleoid occlusion protein -
  AS891_RS02090 (AS891_02090) yyaB 404264..404704 (-) 441 WP_003244005.1 PH domain-containing protein -
  AS891_RS02095 (AS891_02095) soj 404952..405713 (+) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  AS891_RS02100 (AS891_02100) spo0J 405706..406554 (+) 849 WP_003226832.1 stage 0 sporulation protein Spo0J Regulator
  AS891_RS02105 (AS891_02105) yyaC 406593..407210 (-) 618 WP_003243890.1 spore protease YyaC -
  AS891_RS02110 (AS891_02110) - 407670..408686 (+) 1017 WP_010886647.1 membrane protein -
  AS891_RS02115 (AS891_02115) yyzM 408780..408986 (+) 207 WP_003226838.1 DUF951 domain-containing protein -
  AS891_RS02120 (AS891_02120) yyaE 409037..411040 (+) 2004 WP_003244290.1 molybdopterin-dependent oxidoreductase -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=153570 AS891_RS02100 WP_003226832.1 405706..406554(+) (spo0J) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=153570 AS891_RS02100 WP_003226832.1 405706..406554(+) (spo0J) [Bacillus subtilis subsp. subtilis strain KCTC 3135]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment