Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | A6E92_RS29465 | Genome accession | NZ_CP015362 |
| Coordinates | 6852038..6854527 (+) | Length | 829 a.a. |
| NCBI ID | WP_084996512.1 | Uniprot ID | - |
| Organism | Streptomyces sp. S8 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 6847038..6859527
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6E92_RS29450 (A6E92_28940) | - | 6847266..6849227 (+) | 1962 | WP_084996509.1 | acyl-CoA dehydrogenase family protein | - |
| A6E92_RS29455 (A6E92_28945) | - | 6849373..6849978 (-) | 606 | WP_084996510.1 | TetR family transcriptional regulator | - |
| A6E92_RS29460 (A6E92_28950) | - | 6850072..6851100 (+) | 1029 | WP_084996511.1 | oxygenase MpaB family protein | - |
| A6E92_RS29465 (A6E92_28955) | clpC | 6852038..6854527 (+) | 2490 | WP_084996512.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| A6E92_RS33545 | - | 6854530..6854697 (+) | 168 | WP_165272484.1 | hypothetical protein | - |
| A6E92_RS29470 (A6E92_28960) | - | 6854843..6855946 (-) | 1104 | WP_084996513.1 | FAD-dependent oxidoreductase | - |
| A6E92_RS29475 (A6E92_28965) | - | 6856154..6856420 (-) | 267 | WP_018492487.1 | DUF4235 domain-containing protein | - |
| A6E92_RS29480 (A6E92_28970) | - | 6856417..6856905 (-) | 489 | WP_084996514.1 | hypothetical protein | - |
| A6E92_RS29485 (A6E92_28975) | - | 6857019..6857522 (-) | 504 | WP_232790451.1 | ATP-binding protein | - |
| A6E92_RS29490 (A6E92_28980) | - | 6857812..6858681 (+) | 870 | WP_026238317.1 | universal stress protein | - |
Sequence
Protein
Download Length: 829 a.a. Molecular weight: 90213.65 Da Isoelectric Point: 4.8260
>NTDB_id=153479 A6E92_RS29465 WP_084996512.1 6852038..6854527(+) (clpC) [Streptomyces sp. S8]
MSMAFGSPSGSPDPFSDLLNRFFGMSPASSPPAVQRVPIGRLLTEPARELLDAAAGRAVQDGTSDLDTEHLLWAATQVEP
TRRLLARAGVDPDALGERIARVLPRESQEPSSEPGLTPAAKRTLALAHARSQAAEVSYIGPEHILGALLGDADSGASRFL
RAQDMDVSELRGMTDRAPGGQGAAGTGAKEPATTLDEFGRDLTEEARAGRLDPVVGRAEEIEQTIEILSRRSKNNPVLIG
EPGVGKTAIVEGLAQRIVAGEVPDTLKDKRVVSLDLSGMVAGAQYRGQFEERLKKVIEEVQQAEGEVVLFIDELHTVVGA
GATGEGSMDAGNMLKPALARGELHVVGATTIDEYRKHVEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRF
ADGALTSAAELSDRYISDRYLPDKAIDLMDQAGARVRLRSANRSTEVVSREDRLAKLRREKDQAVAAEEFGRAKELKEQI
AEVEGELAGIEERREGVVSVTASDIADIVSRRTGIPVAQLTAGEKERLLGLEEEMHARIVGQGEAVTAVSEAVRRNRAGM
GDPDRPVGSFLFLGPTGVGKTELAKTLAELLFGDEDRMIRFDMSEFQEKHTVARLVGAPPGYVGYEEAGQLTEKVRRRPY
SVVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNIGAHRILAHEGDAAELKDELMEDLRGRFLPEF
LNRIDDIIVFHSLTEDDLSEIVEHLLDRSRHRVHAQGLTLEVTEAAKKLLVAHGHQPAFGARPLRRTIQTELDNRVASLL
LGGEAGPGDTIVADVKDDSLHCTIRTDKE
MSMAFGSPSGSPDPFSDLLNRFFGMSPASSPPAVQRVPIGRLLTEPARELLDAAAGRAVQDGTSDLDTEHLLWAATQVEP
TRRLLARAGVDPDALGERIARVLPRESQEPSSEPGLTPAAKRTLALAHARSQAAEVSYIGPEHILGALLGDADSGASRFL
RAQDMDVSELRGMTDRAPGGQGAAGTGAKEPATTLDEFGRDLTEEARAGRLDPVVGRAEEIEQTIEILSRRSKNNPVLIG
EPGVGKTAIVEGLAQRIVAGEVPDTLKDKRVVSLDLSGMVAGAQYRGQFEERLKKVIEEVQQAEGEVVLFIDELHTVVGA
GATGEGSMDAGNMLKPALARGELHVVGATTIDEYRKHVEKDAALERRFQPVLVPEPTVEETVQILEGLRDAYEAHHQVRF
ADGALTSAAELSDRYISDRYLPDKAIDLMDQAGARVRLRSANRSTEVVSREDRLAKLRREKDQAVAAEEFGRAKELKEQI
AEVEGELAGIEERREGVVSVTASDIADIVSRRTGIPVAQLTAGEKERLLGLEEEMHARIVGQGEAVTAVSEAVRRNRAGM
GDPDRPVGSFLFLGPTGVGKTELAKTLAELLFGDEDRMIRFDMSEFQEKHTVARLVGAPPGYVGYEEAGQLTEKVRRRPY
SVVLFDEVEKAHPDVFNTLLQILDDGRLTDGQGRTVDFRHCVVIMTSNIGAHRILAHEGDAAELKDELMEDLRGRFLPEF
LNRIDDIIVFHSLTEDDLSEIVEHLLDRSRHRVHAQGLTLEVTEAAKKLLVAHGHQPAFGARPLRRTIQTELDNRVASLL
LGGEAGPGDTIVADVKDDSLHCTIRTDKE
Nucleotide
Download Length: 2490 bp
>NTDB_id=153479 A6E92_RS29465 WP_084996512.1 6852038..6854527(+) (clpC) [Streptomyces sp. S8]
ATGTCGATGGCCTTCGGTTCTCCCTCCGGTTCGCCGGACCCCTTCAGCGACCTGCTCAACCGCTTCTTCGGAATGTCACC
GGCCTCCTCACCCCCCGCCGTGCAGCGGGTGCCCATCGGGCGGCTCCTCACCGAACCCGCACGGGAACTGCTGGACGCCG
CCGCGGGCCGGGCGGTCCAGGACGGCACGTCGGACCTCGACACGGAGCATCTGCTGTGGGCCGCCACCCAGGTGGAGCCC
ACCCGCAGACTGCTCGCCCGCGCCGGAGTCGATCCCGACGCGCTCGGCGAGCGGATCGCCAGGGTGCTGCCCCGCGAGTC
CCAGGAGCCGTCCTCCGAGCCCGGACTCACCCCGGCGGCCAAGCGGACCCTCGCCCTGGCCCACGCCCGCTCGCAGGCGG
CCGAGGTCTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTCCTGGGCGACGCCGACTCCGGCGCCTCCCGGTTCCTG
CGCGCACAGGACATGGACGTCTCCGAGCTGCGCGGCATGACCGACCGGGCGCCCGGGGGCCAGGGCGCCGCGGGCACCGG
AGCGAAGGAACCGGCCACCACGCTCGACGAGTTCGGCCGCGACCTGACCGAGGAGGCCAGGGCGGGCAGGCTCGACCCCG
TGGTCGGCCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTGTCCCGGCGCTCCAAGAACAACCCCGTCCTCATCGGG
GAGCCGGGCGTCGGCAAGACCGCCATCGTGGAAGGGCTCGCCCAGCGCATCGTCGCGGGCGAGGTCCCCGACACCCTCAA
GGACAAGCGGGTCGTCTCGCTGGACCTGTCCGGCATGGTCGCCGGGGCCCAGTACCGCGGCCAGTTCGAGGAACGGCTCA
AGAAGGTCATCGAGGAGGTCCAGCAGGCCGAGGGCGAGGTCGTCCTCTTCATCGACGAACTCCACACCGTCGTCGGCGCG
GGCGCGACCGGCGAGGGCTCGATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGCGAACTGCACGTGGTCGG
CGCGACGACCATCGACGAATACCGCAAGCACGTCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCCGTGCTGGTCC
CGGAGCCCACCGTCGAGGAGACCGTACAGATCCTGGAAGGGCTGCGGGACGCATACGAGGCCCACCACCAGGTCCGCTTC
GCCGACGGGGCCCTGACCTCGGCCGCCGAGCTGTCCGACCGCTACATCTCCGACCGCTACCTCCCCGACAAGGCCATCGA
CCTGATGGACCAGGCCGGAGCCCGTGTACGGCTGCGCAGCGCCAACCGCTCCACCGAGGTCGTCAGCCGGGAGGACCGCC
TCGCGAAGCTGCGCCGGGAGAAGGACCAGGCCGTGGCCGCCGAGGAGTTCGGCCGGGCCAAGGAGCTGAAGGAGCAGATC
GCGGAGGTGGAGGGCGAGCTCGCGGGCATCGAGGAACGCCGTGAGGGCGTCGTCTCGGTGACGGCCTCCGACATCGCCGA
CATCGTCTCCCGCCGCACGGGGATCCCGGTCGCCCAGCTCACCGCCGGGGAGAAGGAGCGGCTCCTCGGGCTGGAGGAGG
AGATGCACGCCCGGATCGTCGGCCAGGGCGAGGCCGTCACCGCCGTCTCCGAAGCCGTCCGCCGCAACCGCGCGGGCATG
GGCGACCCCGACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGTCCCACCGGCGTGGGCAAGACCGAACTGGCCAAGACCCT
CGCCGAGCTGCTGTTCGGCGACGAGGACCGGATGATCCGGTTCGACATGAGCGAGTTCCAGGAGAAGCACACGGTCGCCC
GGCTCGTCGGCGCGCCACCCGGCTACGTCGGGTACGAGGAGGCCGGCCAGCTGACCGAGAAGGTGCGCCGCCGCCCGTAC
AGCGTGGTCCTCTTCGACGAGGTGGAGAAGGCCCACCCCGACGTCTTCAACACGCTGCTCCAGATCCTCGACGACGGCCG
TCTCACGGACGGGCAGGGCCGCACGGTCGACTTCCGCCACTGCGTCGTCATCATGACGTCCAACATCGGCGCGCACCGCA
TCCTCGCCCACGAGGGGGATGCCGCCGAGCTGAAGGACGAGCTGATGGAGGACCTGCGGGGGCGGTTCCTGCCGGAGTTC
CTCAACCGCATCGACGACATCATCGTCTTCCACAGCCTCACCGAGGACGACCTCTCCGAGATCGTCGAGCATCTGCTGGA
CCGCAGCAGGCACCGCGTCCACGCGCAGGGGCTGACGCTGGAGGTCACCGAGGCGGCGAAGAAGCTGCTGGTGGCCCACG
GCCACCAGCCGGCGTTCGGCGCCCGTCCGCTGCGCCGCACGATCCAGACGGAGCTGGACAACCGCGTCGCCTCCCTGCTC
CTCGGCGGCGAGGCCGGGCCCGGCGACACGATCGTCGCCGATGTGAAGGACGACTCCCTCCACTGCACGATCCGCACGGA
CAAGGAGTGA
ATGTCGATGGCCTTCGGTTCTCCCTCCGGTTCGCCGGACCCCTTCAGCGACCTGCTCAACCGCTTCTTCGGAATGTCACC
GGCCTCCTCACCCCCCGCCGTGCAGCGGGTGCCCATCGGGCGGCTCCTCACCGAACCCGCACGGGAACTGCTGGACGCCG
CCGCGGGCCGGGCGGTCCAGGACGGCACGTCGGACCTCGACACGGAGCATCTGCTGTGGGCCGCCACCCAGGTGGAGCCC
ACCCGCAGACTGCTCGCCCGCGCCGGAGTCGATCCCGACGCGCTCGGCGAGCGGATCGCCAGGGTGCTGCCCCGCGAGTC
CCAGGAGCCGTCCTCCGAGCCCGGACTCACCCCGGCGGCCAAGCGGACCCTCGCCCTGGCCCACGCCCGCTCGCAGGCGG
CCGAGGTCTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTCCTGGGCGACGCCGACTCCGGCGCCTCCCGGTTCCTG
CGCGCACAGGACATGGACGTCTCCGAGCTGCGCGGCATGACCGACCGGGCGCCCGGGGGCCAGGGCGCCGCGGGCACCGG
AGCGAAGGAACCGGCCACCACGCTCGACGAGTTCGGCCGCGACCTGACCGAGGAGGCCAGGGCGGGCAGGCTCGACCCCG
TGGTCGGCCGGGCCGAGGAGATCGAGCAGACCATCGAGATCCTGTCCCGGCGCTCCAAGAACAACCCCGTCCTCATCGGG
GAGCCGGGCGTCGGCAAGACCGCCATCGTGGAAGGGCTCGCCCAGCGCATCGTCGCGGGCGAGGTCCCCGACACCCTCAA
GGACAAGCGGGTCGTCTCGCTGGACCTGTCCGGCATGGTCGCCGGGGCCCAGTACCGCGGCCAGTTCGAGGAACGGCTCA
AGAAGGTCATCGAGGAGGTCCAGCAGGCCGAGGGCGAGGTCGTCCTCTTCATCGACGAACTCCACACCGTCGTCGGCGCG
GGCGCGACCGGCGAGGGCTCGATGGACGCGGGCAACATGCTCAAGCCCGCCCTCGCCCGCGGCGAACTGCACGTGGTCGG
CGCGACGACCATCGACGAATACCGCAAGCACGTCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCCCGTGCTGGTCC
CGGAGCCCACCGTCGAGGAGACCGTACAGATCCTGGAAGGGCTGCGGGACGCATACGAGGCCCACCACCAGGTCCGCTTC
GCCGACGGGGCCCTGACCTCGGCCGCCGAGCTGTCCGACCGCTACATCTCCGACCGCTACCTCCCCGACAAGGCCATCGA
CCTGATGGACCAGGCCGGAGCCCGTGTACGGCTGCGCAGCGCCAACCGCTCCACCGAGGTCGTCAGCCGGGAGGACCGCC
TCGCGAAGCTGCGCCGGGAGAAGGACCAGGCCGTGGCCGCCGAGGAGTTCGGCCGGGCCAAGGAGCTGAAGGAGCAGATC
GCGGAGGTGGAGGGCGAGCTCGCGGGCATCGAGGAACGCCGTGAGGGCGTCGTCTCGGTGACGGCCTCCGACATCGCCGA
CATCGTCTCCCGCCGCACGGGGATCCCGGTCGCCCAGCTCACCGCCGGGGAGAAGGAGCGGCTCCTCGGGCTGGAGGAGG
AGATGCACGCCCGGATCGTCGGCCAGGGCGAGGCCGTCACCGCCGTCTCCGAAGCCGTCCGCCGCAACCGCGCGGGCATG
GGCGACCCCGACCGGCCCGTCGGCTCGTTCCTCTTCCTCGGTCCCACCGGCGTGGGCAAGACCGAACTGGCCAAGACCCT
CGCCGAGCTGCTGTTCGGCGACGAGGACCGGATGATCCGGTTCGACATGAGCGAGTTCCAGGAGAAGCACACGGTCGCCC
GGCTCGTCGGCGCGCCACCCGGCTACGTCGGGTACGAGGAGGCCGGCCAGCTGACCGAGAAGGTGCGCCGCCGCCCGTAC
AGCGTGGTCCTCTTCGACGAGGTGGAGAAGGCCCACCCCGACGTCTTCAACACGCTGCTCCAGATCCTCGACGACGGCCG
TCTCACGGACGGGCAGGGCCGCACGGTCGACTTCCGCCACTGCGTCGTCATCATGACGTCCAACATCGGCGCGCACCGCA
TCCTCGCCCACGAGGGGGATGCCGCCGAGCTGAAGGACGAGCTGATGGAGGACCTGCGGGGGCGGTTCCTGCCGGAGTTC
CTCAACCGCATCGACGACATCATCGTCTTCCACAGCCTCACCGAGGACGACCTCTCCGAGATCGTCGAGCATCTGCTGGA
CCGCAGCAGGCACCGCGTCCACGCGCAGGGGCTGACGCTGGAGGTCACCGAGGCGGCGAAGAAGCTGCTGGTGGCCCACG
GCCACCAGCCGGCGTTCGGCGCCCGTCCGCTGCGCCGCACGATCCAGACGGAGCTGGACAACCGCGTCGCCTCCCTGCTC
CTCGGCGGCGAGGCCGGGCCCGGCGACACGATCGTCGCCGATGTGAAGGACGACTCCCTCCACTGCACGATCCGCACGGA
CAAGGAGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
50.25 |
96.502 |
0.485 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.318 |
96.622 |
0.438 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.858 |
84.922 |
0.423 |
| clpC | Streptococcus mutans UA159 |
42.233 |
99.397 |
0.42 |
| clpC | Streptococcus thermophilus LMD-9 |
42.629 |
98.191 |
0.419 |
| clpE | Streptococcus mutans UA159 |
53.323 |
74.427 |
0.397 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.993 |
87.937 |
0.396 |
| clpC | Streptococcus thermophilus LMG 18311 |
43.542 |
90.591 |
0.394 |
| clpC | Streptococcus pneumoniae Rx1 |
44.856 |
87.937 |
0.394 |
| clpC | Streptococcus pneumoniae D39 |
44.856 |
87.937 |
0.394 |
| clpE | Streptococcus pneumoniae Rx1 |
53.028 |
73.703 |
0.391 |
| clpE | Streptococcus pneumoniae R6 |
53.028 |
73.703 |
0.391 |
| clpE | Streptococcus pneumoniae D39 |
53.028 |
73.703 |
0.391 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.951 |
73.583 |
0.39 |