Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AKO65_RS18415 Genome accession   NZ_CP012329
Coordinates   3635654..3636604 (-) Length   316 a.a.
NCBI ID   WP_057079734.1    Uniprot ID   -
Organism   Bacillus altitudinis strain NJ-M2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3630654..3641604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AKO65_RS18385 (AKO65_18395) - 3630783..3631145 (+) 363 WP_017360224.1 hypothetical protein -
  AKO65_RS18390 (AKO65_18400) - 3631232..3631666 (+) 435 WP_057079729.1 hypothetical protein -
  AKO65_RS18395 (AKO65_18405) - 3631899..3632855 (-) 957 WP_057079730.1 LCP family protein -
  AKO65_RS18400 (AKO65_18410) - 3632995..3633939 (-) 945 WP_057079731.1 siderophore ABC transporter substrate-binding protein -
  AKO65_RS18405 (AKO65_18415) - 3633962..3634720 (-) 759 WP_057079732.1 ABC transporter ATP-binding protein -
  AKO65_RS18410 (AKO65_18420) - 3634711..3635661 (-) 951 WP_057079733.1 iron chelate uptake ABC transporter family permease subunit -
  AKO65_RS18415 (AKO65_18425) ceuB 3635654..3636604 (-) 951 WP_057079734.1 ABC transporter permease Machinery gene
  AKO65_RS18420 (AKO65_18430) - 3636763..3637041 (-) 279 WP_025207101.1 barstar family protein -
  AKO65_RS18425 (AKO65_18435) - 3637104..3638273 (-) 1170 WP_057079735.1 MFS transporter -
  AKO65_RS18430 (AKO65_18440) - 3638417..3639856 (+) 1440 WP_205627787.1 PLP-dependent aminotransferase family protein -
  AKO65_RS18435 (AKO65_18445) - 3639887..3640369 (-) 483 WP_046343108.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34999.38 Da        Isoelectric Point: 9.7475

>NTDB_id=153467 AKO65_RS18415 WP_057079734.1 3635654..3636604(-) (ceuB) [Bacillus altitudinis strain NJ-M2]
MKLYQLSLLFVCLACASLFVGVQDLPLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMTIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIISSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=153467 AKO65_RS18415 WP_057079734.1 3635654..3636604(-) (ceuB) [Bacillus altitudinis strain NJ-M2]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGCCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGAC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTATTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.333

94.937

0.497

Multiple sequence alignment