Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   A6E92_RS06620 Genome accession   NZ_CP015362
Coordinates   1682121..1682918 (+) Length   265 a.a.
NCBI ID   WP_019762227.1    Uniprot ID   A0ABY2PL81
Organism   Streptomyces sp. S8     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1677121..1687918
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6E92_RS06605 (A6E92_06480) - 1677371..1677907 (+) 537 WP_032756281.1 TerD family protein -
  A6E92_RS06610 (A6E92_06485) - 1678067..1680958 (-) 2892 WP_084991720.1 vitamin B12-dependent ribonucleotide reductase -
  A6E92_RS06615 (A6E92_06490) nrdR 1681124..1681636 (-) 513 WP_018488320.1 transcriptional regulator NrdR -
  A6E92_RS06620 (A6E92_06495) dinR/lexA 1682121..1682918 (+) 798 WP_019762227.1 transcriptional repressor LexA Regulator
  A6E92_RS06625 (A6E92_06500) - 1682994..1684964 (-) 1971 WP_028419063.1 ATP-dependent DNA helicase -
  A6E92_RS06630 (A6E92_06505) - 1685003..1686904 (-) 1902 WP_084991722.1 IucA/IucC family siderophore biosynthesis protein -
  A6E92_RS06635 (A6E92_06510) - 1686965..1687804 (-) 840 WP_084991724.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 28743.49 Da        Isoelectric Point: 7.4761

>NTDB_id=153428 A6E92_RS06620 WP_019762227.1 1682121..1682918(+) (dinR/lexA) [Streptomyces sp. S8]
MTTTADSATITARDHRSQSRLEPVHAMNDSLTNTDGPEPGRPGRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGY
PPSMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTTGKPAASYVPLVGRIAAGGPILA
EESVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFRREDGHVWLLPH
NAAYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 798 bp        

>NTDB_id=153428 A6E92_RS06620 WP_019762227.1 1682121..1682918(+) (dinR/lexA) [Streptomyces sp. S8]
GTGACCACGACCGCAGACAGTGCCACCATCACCGCCCGGGACCACCGCTCCCAGAGCCGACTTGAGCCGGTGCATGCCAT
GAATGACTCACTGACGAACACGGACGGGCCCGAGCCCGGCCGCCCCGGCCGTGCCTTGCCCGGCAGGCCTCCAGGGATCA
GGGCGGACAGCTCGGGTCTCACGGACCGGCAGCGGCGGGTCATCGAGGTCATCCGCGACTCGGTGCAGCGCCGGGGATAC
CCGCCGTCGATGCGGGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACGTCGTCCGTCGCCCACCAGCTGATGGCCCTGGA
GCGCAAGGGCTTCCTCCGGCGCGATCCGCACCGGCCCCGCGCCTACGAGGTTCGCGGCTCCGACCAGCCCAGCACCCAGC
CGACCGACACGACCGGGAAGCCCGCCGCCTCCTACGTCCCCCTGGTGGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCC
GAGGAGTCGGTCGAGGACGTCTTCCCGCTGCCGCGCCAGCTCGTCGGTGACGGTGAGCTGTTCGTGCTGAAGGTCGTCGG
TGACTCGATGATCGAAGCGGCGATCTGCGACGGCGACTGGGTCACCGTGCGCCGCCAGCCCGTCGCGGAGAACGGGGACA
TCGTCGCCGCGATGCTGGACGGCGAGGCGACCGTGAAGCGCTTCCGGCGCGAGGACGGGCACGTCTGGCTGCTGCCGCAC
AACGCCGCGTACCAGCCGATCCCCGGTGACGAGGCGACGATCCTCGGCAAGGTGGTGGCGGTGCTGCGACGGGTGTGA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(58-121)

Peptidase S24-like (Peptidase_S24)

(147-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80

0.37